Sequence 1: | NP_511045.1 | Gene: | snf / 31442 | FlyBaseID: | FBgn0003449 | Length: | 216 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_004587.1 | Gene: | SNRPA / 6626 | HGNCID: | 11151 | Length: | 282 | Species: | Homo sapiens |
Alignment Length: | 286 | Identity: | 156/286 - (54%) |
---|---|---|---|
Similarity: | 179/286 - (62%) | Gaps: | 79/286 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 EMLPNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNAL 66
Fly 67 RTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKK--------------------------- 104
Fly 105 -----------------------------------VKPPKPAPGTDEKKDKKKKPSSA------- 127
Fly 128 ENSNPNAQ--TEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQ 190
Fly 191 SNAAKEALQGFKITPTHAMKITFAKK 216 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snf | NP_511045.1 | RRM | <5..177 | CDD:223796 | 126/242 (52%) |
RRM_SF | 6..96 | CDD:302621 | 72/89 (81%) | ||
RRM2_SNF | 137..216 | CDD:240923 | 63/78 (81%) | ||
SNRPA | NP_004587.1 | RRM1_U1A | 7..95 | CDD:409906 | 71/87 (82%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 100..132 | 5/31 (16%) | |||
RRM2_U1A | 197..282 | CDD:409908 | 65/84 (77%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 127 | 1.000 | Domainoid score | I5403 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4206 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3380 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0.928771 | Normalized mean entropy | S1235 |
OMA | 1 | 1.010 | - | - | QHG54412 | |
OrthoDB | 1 | 1.010 | - | - | D1608132at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001375 | |
OrthoInspector | 1 | 1.000 | - | - | otm41837 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100753 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10501 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1270 |
SonicParanoid | 1 | 1.000 | - | - | X1105 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.810 |