Protein Alignment snf and Snrpb2

DIOPT Version :9

• Sequence 1: NP_511045.1
• Gene: snf / 31442
• FlyBaseID: FBgn0003449
• Length: 216
• Species: Drosophila melanogaster
• Sequence 2: NP_067310.1
• Gene: Snrpb2 / 20639
• MGIID: 104805
• Length: 225
• Species: Mus musculus
• Alignment Length: 225
• Identity: 149/225 - (66%)
• Similarity: 181/225 - (80%)
• Gaps: 9/225 - (4%)

  Fly     1 MEMLPNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNA 65
            |::.||.||||||:|:||||||||:||||:|||||.::|||||||:||||||||||||:||::||
Mouse     1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNA 65

  Fly    66 LRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTF-----KERPKKVKPPKPAPGTDEKKDKKKKPS 125
            ||.:||||||.|||:|.|:|:||||::|::|||     |:..||.|..:.|.....||..:..|:
Mouse    66 LRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTMEQAAAAANKKPGQGTPN 130

  Fly   126 SAENSN---PNAQT-EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFT 186
            :|....   ||.|. :.|||.||||.||||||||||||||||||||||||||||.|||||||||.
Mouse   131 AANTQGTAAPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFE 195

  Fly   187 TELQSNAAKEALQGFKITPTHAMKITFAKK 216
            .:.|:.||::|||||||||:||||||:|||
Mouse   196 NDGQAGAARDALQGFKITPSHAMKITYAKK 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snf	NP_511045.1	RRM	<5..177	CDD:223796	118/180 (66%)
		RRM_SF	6..96	CDD:302621	67/89 (75%)
		RRM2_SNF	137..216	CDD:240923	63/78 (81%)
Snrpb2	NP_067310.1	RRM1_U2B	6..96	CDD:240922	67/89 (75%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	100..144		11/43 (26%)
		RRM2_U2B	146..225	CDD:240925	63/78 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167837323
Domainoid	1	1.000	108	1.000	Domainoid score	I6451
eggNOG	1	0.900	-	-		E1_KOG4206
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	295	1.000	Inparanoid score	I2728
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54412
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001375
OrthoInspector	1	1.000	-	-		otm43887
orthoMCL	1	0.900	-	-		OOG6_100753
Panther	1	1.100	-	-	O	PTHR10501
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1270
SonicParanoid	1	1.000	-	-		X1105
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.790