Sequence 1: | NP_511045.1 | Gene: | snf / 31442 | FlyBaseID: | FBgn0003449 | Length: | 216 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_500505.1 | Gene: | rnp-3 / 177182 | WormBaseID: | WBGene00004386 | Length: | 217 | Species: | Caenorhabditis elegans |
Alignment Length: | 214 | Identity: | 104/214 - (48%) |
---|---|---|---|
Similarity: | 148/214 - (69%) | Gaps: | 4/214 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 PNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTM 69
Fly 70 QGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDKKKKPSSAENSNPNA 134
Fly 135 QTEQP--PNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEA 197
Fly 198 LQGFKITPTHAMKITFAKK 216 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snf | NP_511045.1 | RRM | <5..177 | CDD:223796 | 86/173 (50%) |
RRM_SF | 6..96 | CDD:302621 | 52/89 (58%) | ||
RRM2_SNF | 137..216 | CDD:240923 | 36/80 (45%) | ||
rnp-3 | NP_500505.1 | RRM | <6..177 | CDD:223796 | 85/172 (49%) |
RRM1_U1A_like | 9..86 | CDD:240692 | 48/76 (63%) | ||
RRM2_U1A_like | 141..212 | CDD:240693 | 33/70 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160159497 | |
Domainoid | 1 | 1.000 | 106 | 1.000 | Domainoid score | I4156 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 215 | 1.000 | Inparanoid score | I2340 |
Isobase | 1 | 0.950 | - | 0.928771 | Normalized mean entropy | S1235 |
OMA | 1 | 1.010 | - | - | QHG54412 | |
OrthoDB | 1 | 1.010 | - | - | D1608132at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001375 | |
OrthoInspector | 1 | 1.000 | - | - | otm14394 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100753 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10501 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1105 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.820 |