DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and CDKD1;1

DIOPT Version :9

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_177510.1 Gene:CDKD1;1 / 843704 AraportID:AT1G73690 Length:398 Species:Arabidopsis thaliana


Alignment Length:345 Identity:156/345 - (45%)
Similarity:225/345 - (65%) Gaps:19/345 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ERYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQHENI 74
            :||.|...||:|.:..|:||.||...:.||:|||:.|..   ::|:|.|||||||:|:||:|.:|
plant     9 DRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIRLGKE---KEGVNVTALREIKLLKELKHPHI 70

  Fly    75 IGLVDVFGQLSNVSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHLNWILHRDLK 139
            |.|:|.|....|:.:||:||:||||.:|:|..:.|:..::|:|..|.||||||.|..|:||||:|
plant    71 IELIDAFPHKENLHIVFEFMETDLEAVIRDRNLYLSPGDVKSYLQMILKGLEYCHGKWVLHRDMK 135

  Fly   140 PNNLLVNSDGILKIGDFGLAKSFGSPNRIYTHHVVTRWYRSPELLFGARQYGTGVDMWAVGCILA 204
            |||||:..:|.||:.|||||:.||||.|.:||.|..||||:|||||||:||...||:||.|||.|
plant   136 PNNLLIGPNGQLKLADFGLARIFGSPGRKFTHQVFARWYRAPELLFGAKQYDGAVDVWAAGCIFA 200

  Fly   205 ELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDYLQFRNFPGTPLDNIFTAAGNDLI 269
            ||:||.||:.|:||:|||::||:..|||...:||.:..|.||::::..|...|.::......|.:
plant   201 ELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDMICLPDYVEYQFVPAPSLRSLLPTVSEDAL 265

  Fly   270 HLMQRLFAMNPLRRVSCREALSMPYFANKPAPTVGPKLPMPSAILAAKEGANPQTGDTK------ 328
            .|:.::|..:|..|:|.::||...||.:.|:||...|||.|    .:|:.|  ::.|:|      
plant   266 DLLSKMFTYDPKSRISIQQALKHRYFTSAPSPTDPLKLPRP----VSKQDA--KSSDSKLEAIKV 324

  Fly   329 --PA--LKRKLVETTVRGNG 344
              ||  .:|.:.:....|||
plant   325 LSPAHKFRRVMPDRGKSGNG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 PTZ00024 6..308 CDD:240233 143/297 (48%)
STKc_CDK7 11..308 CDD:270833 143/296 (48%)
CDKD1;1NP_177510.1 STKc_CDK7 10..304 CDD:270833 143/296 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 321 1.000 Domainoid score I276
eggNOG 1 0.900 - - E1_KOG0659
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 341 1.000 Inparanoid score I639
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1367115at2759
OrthoFinder 1 1.000 - - FOG0003675
OrthoInspector 1 1.000 - - otm2517
orthoMCL 1 0.900 - - OOG6_103547
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2548
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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