DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and AT1G09600

DIOPT Version :10

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_172431.1 Gene:AT1G09600 / 837487 AraportID:AT1G09600 Length:714 Species:Arabidopsis thaliana


Alignment Length:336 Identity:126/336 - (37%)
Similarity:185/336 - (55%) Gaps:27/336 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KTERYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQHE 72
            |.:.:.||..:|:|.:::||||||..|||:||:||::..:.:.  |.: |...|||.||:.|.|.
plant   159 KADSFEKLEKIGQGTYSSVYKARDLETNQLVALKKVRFANMDP--DSV-RFMAREIIILRRLDHP 220

  Fly    73 NII---GLVDVFGQLSNVS----LVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHL 130
            |::   ||:     .|.||    |:|::|:.||..:.....|..::|.||.|....|.|||:.|.
plant   221 NVMKLEGLI-----TSRVSGSMYLIFEYMEHDLAGLASTPGINFSEAQIKCYMKQLLHGLEHCHS 280

  Fly   131 NWILHRDLKPNNLLVNSDGILKIGDFGLAKSF-GSPNRIYTHHVVTRWYRSPELLFGARQYGTGV 194
            ..:||||:|.:|||::.:..|||||||||..: |...:..|..|||.|||.||||.|:..||..|
plant   281 RGVLHRDIKGSNLLLDHNNNLKIGDFGLANFYQGHQKQPLTSRVVTLWYRPPELLLGSTDYGVTV 345

  Fly   195 DMWAVGCILAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDYLQFRNFPGTP--- 256
            |:|:.|||||||....|.|||.::::||.:||...|:|:|..| .:|||.....|:  |..|   
plant   346 DLWSTGCILAELFTGKPIMPGRTEVEQLHKIFKLCGSPSEEYW-KISKLPHATIFK--PQQPYKR 407

  Fly   257 -LDNIFTAAGNDLIHLMQRLFAMNPLRRVSCREALSMPYFANKPA---PTVGPKL-PMPSAILAA 316
             :...|.:..:..:.|::.|.|:.|..|.:...||...:|...|.   |:..||. |.....:.|
plant   408 CVAETFKSLPSSALALVEVLLAVEPDARGTTASALESEFFTTSPLASDPSSLPKYQPRKEIDVKA 472

  Fly   317 KEGANPQTGDT 327
            :|....:..||
plant   473 QEEEAKRKKDT 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 STKc_CDK7 11..308 CDD:270833 120/312 (38%)
AT1G09600NP_172431.1 STKc_CDK9_like 163..447 CDD:270832 115/294 (39%)

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