DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and cdk20

DIOPT Version :9

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_009302023.1 Gene:cdk20 / 494112 ZFINID:ZDB-GENE-041212-84 Length:359 Species:Danio rerio


Alignment Length:305 Identity:130/305 - (42%)
Similarity:194/305 - (63%) Gaps:7/305 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ERYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQ-HEN 73
            ::|:.|..:|||....|:||:...|.:.||:||:.....|   |||...||||||.|||:: ::.
Zfish    17 DQYSILGRIGEGAHGIVFKAKHIETGETVALKKVALRRLE---DGIPNQALREIKALQEIEDNQY 78

  Fly    74 IIGLVDVFGQLSNVSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHLNWILHRDL 138
            ::.|.|||...:...|||::|.:||..:|::::..||.:.:|:|.:|.|||:.:.|.|.|:||||
Zfish    79 VVKLKDVFPHGTGFVLVFEYMLSDLSEVIRNSQRPLTASQVKSYMMMLLKGVAFCHENSIMHRDL 143

  Fly   139 KPNNLLVNSDGILKIGDFGLAKSFGSP-NRIYTHHVVTRWYRSPELLFGARQYGTGVDMWAVGCI 202
            ||.|||::|.|.|||.|||||:.|.:. :|:|:|.|.|||||:||||:|||:|..|||:||||||
Zfish   144 KPANLLISSTGHLKIADFGLARLFSNEGDRLYSHQVATRWYRAPELLYGARKYDEGVDLWAVGCI 208

  Fly   203 LAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDY--LQFRNFPGTPLDNIFTAAG 265
            ..||:...|..||::|::||..:...||||.:..||.:::|.||  :.|:..|..||:.|.....
Zfish   209 FGELLNNSPLFPGENDIEQLCCVLRVLGTPNQKVWPEITELPDYNKITFKENPPIPLEEIVPDTS 273

  Fly   266 NDLIHLMQRLFAMNPLRRVSCREALSMPYFANKPAPTVGPKLPMP 310
            ...:.|:::.......:|:|.|:||..|||...|.|....:||:|
Zfish   274 PQAVDLLKKFLVYPSKQRISARQALLHPYFFTDPLPAHHSELPIP 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 PTZ00024 6..308 CDD:240233 127/301 (42%)
STKc_CDK7 11..308 CDD:270833 127/300 (42%)
cdk20XP_009302023.1 PLN00009 16..303 CDD:177649 123/288 (43%)
STKc_CCRK 18..304 CDD:270826 124/288 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0659
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1367115at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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