DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and mcs6

DIOPT Version :9

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_596349.1 Gene:mcs6 / 2540471 PomBaseID:SPBC19F8.07 Length:335 Species:Schizosaccharomyces pombe


Alignment Length:351 Identity:153/351 - (43%)
Similarity:228/351 - (64%) Gaps:24/351 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DKTER--YAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQEL 69
            :|:::  |.|...:|||.:|.|:..|...||:.||:||||.|   ..:|||:.:||||||.|:|.
pombe     4 EKSDKWTYVKERKVGEGTYAVVFLGRQKETNRRVAIKKIKVG---QFKDGIDISALREIKFLRES 65

  Fly    70 QHENIIGLVDVFGQLSNVSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHLNWIL 134
            :|:|:|.|||||...||::::.:|:|:|||::|||..|:...|:||::.:|.|:||.::|..:||
pombe    66 RHDNVIELVDVFSTKSNLNIILEFLDSDLEMLIKDKFIVFQPAHIKSWMVMLLRGLHHIHSRFIL 130

  Fly   135 HRDLKPNNLLVNSDGILKIGDFGLAKSFGSPNRIYTHHVVTRWYRSPELLFGARQYGTGVDMWAV 199
            ||||||||||::|||:||:.||||::.||:|:.: :|.|:|||||.|||..|.|.||||||||:|
pombe   131 HRDLKPNNLLISSDGVLKLADFGLSRDFGTPSHM-SHQVITRWYRPPELFMGCRSYGTGVDMWSV 194

  Fly   200 GCILAELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDYLQFRNF--PGTPLDNIFT 262
            |||.||||||.|::||:||||||..||..||||.......:.:|.:|::.::.  |...::.:|:
pombe   195 GCIFAELMLRTPYLPGESDLDQLNVIFRALGTPEPEVIKSMQQLPNYVEMKHIPPPNGGMEALFS 259

  Fly   263 AAGNDLIHLMQRLFAMNPLRRVSCREALSMPYFANKPAPTVGPKLPMPSAILAAKEGANPQTGDT 327
            |||::.|.|::.:...||.||.:.::||...||:..|.||....||..    ..:||....:.|.
pombe   260 AAGHEEIDLLKMMLDYNPYRRPTAQQALEHHYFSALPKPTHPSLLPRK----GGEEGIKHVSSDL 320

  Fly   328 KPALKRKLVETTVRGNGLAQKKRLQF 353
            :            |.|....:..::|
pombe   321 Q------------RQNNFPMRANIKF 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 PTZ00024 6..308 CDD:240233 145/304 (48%)
STKc_CDK7 11..308 CDD:270833 144/300 (48%)
mcs6NP_596349.1 STKc_CDK7 11..305 CDD:270833 144/297 (48%)
Pkinase 11..292 CDD:278497 139/284 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 289 1.000 Domainoid score I285
eggNOG 1 0.900 - - E1_KOG0659
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1363
Inparanoid 1 1.050 296 1.000 Inparanoid score I617
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003675
OrthoInspector 1 1.000 - - oto100591
orthoMCL 1 0.900 - - OOG6_103547
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R249
SonicParanoid 1 1.000 - - X2548
TreeFam 1 0.960 - -
1312.850

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