DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk7 and cdk-7

DIOPT Version :9

Sequence 1:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001370652.1 Gene:cdk-7 / 171784 WormBaseID:WBGene00000408 Length:330 Species:Caenorhabditis elegans


Alignment Length:330 Identity:174/330 - (52%)
Similarity:237/330 - (71%) Gaps:7/330 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TERYAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQHEN 73
            :.||..:..|||||||.||.|:|..:.:.||:||||.||||:|:|||||||:||||:|:|:.|:|
 Worm     2 SRRYDTIKHLGEGQFANVYLAQDLESGECVAIKKIKLGSREEAKDGINRTAIREIKLLKEIHHDN 66

  Fly    74 IIGLVDVFGQLSNVSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHLNWILHRDL 138
            ||||.||.|..:::.|||||||||||.:|||.:|||..|:||...:..|.|||:||::|||||||
 Worm    67 IIGLRDVIGHRTSIQLVFDFMDTDLEHVIKDKEIILMPAHIKNITMQMLLGLEFLHVHWILHRDL 131

  Fly   139 KPNNLLVNSDGILKIGDFGLAKSFGSPNRIYTHHVVTRWYRSPELLFGARQYGTGVDMWAVGCIL 203
            ||||||:|..|.:|:.|||||:.||||||.|||.|||||||:||||||||.||.|:|:|:||||:
 Worm   132 KPNNLLMNKMGRVKLTDFGLARFFGSPNRNYTHQVVTRWYRAPELLFGARSYGVGIDIWSVGCII 196

  Fly   204 AELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDYLQFRNFPGT---PLDNIFTAAG 265
            |||:||.|..||:||:|||.:||:.||.||...||::::::.|:..:  |.|   .|:..|:||.
 Worm   197 AELLLRNPIFPGESDIDQLVKIFNILGCPTPETWPNMTEMNSYVIIK--PQTEYMALNYYFSAAP 259

  Fly   266 NDLIHLMQRLFAMNPLRRVSCREALSMPYFANKPAPTVGPKLPMPSAILAAKEGANPQTGDTKPA 330
            .||:.||..::..:|::|::|.::|.|.||..:|...:..:||:|......|.........|:|.
 Worm   260 QDLLDLMAGMWTFDPIKRLTCTQSLQMEYFRTQPFCCLDEELPLPKKQQPQKRSRRLDDDGTRPV 324

  Fly   331 LKRKL 335
              |:|
 Worm   325 --RRL 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk7NP_511044.1 PTZ00024 6..308 CDD:240233 166/301 (55%)
STKc_CDK7 11..308 CDD:270833 166/299 (56%)
cdk-7NP_001370652.1 STKc_CDK7 4..302 CDD:270833 166/299 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157777
Domainoid 1 1.000 343 1.000 Domainoid score I567
eggNOG 1 0.900 - - E1_KOG0659
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1363
Inparanoid 1 1.050 355 1.000 Inparanoid score I1311
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53505
OrthoDB 1 1.010 - - D1367115at2759
OrthoFinder 1 1.000 - - FOG0003675
OrthoInspector 1 1.000 - - oto18927
orthoMCL 1 0.900 - - OOG6_103547
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R249
SonicParanoid 1 1.000 - - X2548
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.840

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