Protein Alignment Rpn13R and RPN13

DIOPT Version :9

• Sequence 1: NP_572205.1
• Gene: Rpn13R / 31433
• FlyBaseID: FBgn0029745
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001031424.1
• Gene: RPN13 / 817200
• AraportID: AT2G26590
• Length: 300
• Species: Arabidopsis thaliana
• Alignment Length: 335
• Identity: 89/335 - (26%)
• Similarity: 143/335 - (42%)
• Gaps: 92/335 - (27%)

  Fly     9 LVEYKAGRMVLLGKMVEPDDRKGLLFVRRSADDNQLHIHWMDRRSGSVELDIVATPGVLEFRRID 73
            ::|::||:|.|.|..|.||.||||:.:.| .|:..:|..|:||...:||.|.:..|....|.:::
plant    14 MLEFRAGKMSLQGTRVVPDARKGLVRIAR-GDEGLIHFQWLDRNQNTVEDDQIVFPDEALFEKVN 77

  Fly    74 QCKTGRVYVLKYTRSTQRYFFWMQELQADGDALFCQRVNELIAS-----GERQRDEIAAA--EGD 131
            | .:.|||:||:....::.||||||.:|:|||..|..||:.:..     ||   :.:|||  |..
plant    78 Q-SSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQPLEFPGE---EGLAAAITEEL 138

  Fly   132 MDTDADHTTARRGFGGSENPQILEEMLVETQATWLPANRSLNHWQTGDAMEEPPLPFADPDANTD 196
            .|...|:|::|.|           .::|                                 .|..
plant   139 EDMAEDNTSSRAG-----------NLVV---------------------------------PNLS 159

  Fly   197 TDTDTYTSESG-IQTFDLAAVL-RLHGA--------------------EAVDKVLSCPSRREKLM 239
            ::....||.|| ::..||..:| .|.|.                    |.:..:|.....:|:|.
plant   160 SEVSDVTSSSGPVKLADLQRILNNLSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLS 224

  Fly   240 AQLPKDHEAMDEQSDILEHLHSAQFYESLSSFSVGLHSGALRKSLEPLLQSDDNREALNAAQVG- 303
            :.||:.|...:   ||||.|.|..|.:.:.:|:..|.:|          |.|..:..::.::..
plant   225 SHLPEGHSRAE---DILELLQSPPFRQQVDAFTYVLRTG----------QIDLTQFGIDPSKYKF 276

  Fly   304 DVERFLRELE 313
            .|:.||..||
plant   277 TVDSFLEALE 286

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn13R	NP_572205.1	PH_Rpn13	10..115	CDD:270124	43/104 (41%)
		RPN13_C	204..312	CDD:293158	30/130 (23%)
RPN13	NP_001031424.1	PH_Rpn13	15..118	CDD:270124	43/104 (41%)
		RPN13_C	192..285	CDD:406854	22/105 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	95	1.000	Domainoid score	I2499
eggNOG	1	0.900	-	-		E1_KOG3037
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	131	1.000	Inparanoid score	I1876
OMA	1	1.010	-	-		QHG55589
OrthoDB	1	1.010	-	-		D1479349at2759
OrthoFinder	1	1.000	-	-		FOG0003818
OrthoInspector	1	1.000	-	-		otm3038
orthoMCL	1	0.900	-	-		OOG6_102724
Panther	1	1.100	-	-	O	PTHR12225
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2662
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.840