DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn13R and adrm1

DIOPT Version :10

Sequence 1:NP_572205.1 Gene:Rpn13R / 31433 FlyBaseID:FBgn0029745 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_989049.1 Gene:adrm1 / 394646 XenbaseID:XB-GENE-489445 Length:404 Species:Xenopus tropicalis


Alignment Length:375 Identity:113/375 - (30%)
Similarity:167/375 - (44%) Gaps:75/375 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SNAHNLVEYKAGRMVLLGKMVEPDDRKGLLFVRRSADDNQLHIHWMDRRSGSVELDIVATPGVLE 68
            |::..|||::||:|.|.|..|.||.||||:::::: ||:.:|..|.||.|||||.|::..|...|
 Frog    17 SSSKYLVEFRAGKMSLKGSTVTPDKRKGLVYIQQT-DDSLIHFCWKDRTSGSVEDDLIIFPDDCE 80

  Fly    69 FRRIDQCKTGRVYVLKYTRSTQRYFFWMQELQADGDALFCQRVNELI------------ASGERQ 121
            |:|:.||.||||||||:...::|.||||||.:.|.|..:|::|||.:            .||..:
 Frog    81 FKRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKVNEYLNNPPMPGALGGSGSGGHE 145

  Fly   122 RDEIAAAEGDMDT---DADHT--------TARRGFGG---------------------------- 147
            ...: ..||.:.:   :..|.        |...|.||                            
 Frog   146 LSAL-GGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGGLGALTGPGLASLLGSGGPTTSSSSSSSR 209

  Fly   148 SENPQILEEMLV-ETQATWLPANR------------SLNHWQTGDAMEEPPLPFADPDANTDTDT 199
            |::..:...... .|:.|..||..            |.|...:.......|:..:|......|..
 Frog   210 SQSAAVTPSSTTSSTRTTSAPAAPAAAPATTPSPAVSSNDGASAATSPTQPIQLSDLQNILATMN 274

  Fly   200 DTYTSESGIQTFDLAAVLRLHGAEAVDKVLSCPSRREKLMAQLPKDHEAMDEQSDILEHLHSAQF 264
            ...|.|.| |..|||:||.   .|.:..:|:....:|:||..||..........:|...|.|.||
 Frog   275 VPATGEGG-QQVDLASVLT---PEIMAPILANAEVQERLMPYLPSGESLPQTADEIQNTLTSPQF 335

  Fly   265 YESLSSFSVGLHSGALRKSLEPLL-QSDDNREALNAAQVGDVERFLRELE 313
            .::||.||..|.||    .|.||: |.....:|::||..||:|.|.:.::
 Frog   336 QQALSMFSAALASG----QLGPLMSQFGLPADAVDAANKGDIEAFAKAMQ 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn13RNP_572205.1 PH_Rpn13 10..115 CDD:270124 53/104 (51%)
RPN13_C 209..312 CDD:465170 36/103 (35%)
adrm1NP_989049.1 PH_Rpn13 23..127 CDD:270124 53/104 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..258 7/62 (11%)
RPN13_C 273..380 CDD:465170 39/114 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 377..404 0/5 (0%)

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