Protein Alignment Rpn13R and rpn-13

DIOPT Version :9

• Sequence 1: NP_572205.1
• Gene: Rpn13R / 31433
• FlyBaseID: FBgn0029745
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001348746.1
• Gene: rpn-13 / 3565888
• WormBaseID: WBGene00016981
• Length: 406
• Species: Caenorhabditis elegans
• Alignment Length: 366
• Identity: 90/366 - (24%)
• Similarity: 149/366 - (40%)
• Gaps: 84/366 - (22%)

  Fly     1 MAQSNAHNLVEYKAGRMVL-------LGKMV-EPDDRKGLLFVRRSADDNQLHIHWMDRRSGSVE 57
            :|.|:.| :||:||||..|       :.|:| ||  :|||:|:::| :|..:|..|.||.:|:|.
 Worm    11 VASSSGH-IVEFKAGRSRLEAGSGDTMRKVVAEP--KKGLVFIKQS-NDMLIHFCWKDRETGAVV 71

  Fly    58 LDIVATPGVLEFRRIDQCKTGRVYVLKYTRSTQRYFFWMQELQADGDALFCQRVNELIASGERQR 122
            .|::..|...||:.:..|..|:||:||: :|.....||:|:...|.|....::|.:.:......|
 Worm    72 DDLIIFPDDAEFKAVPGCPDGKVYMLKF-KSGDMKLFWIQDSTPDVDKDLVKKVTDALNKPPTSR 135

  Fly   123 DEIAAAEGDMDTDADHTTARRGFGGSENPQILEEMLVETQATWLPANRSLNHWQTGDAM------ 181
            ...:.:.|     ::..|.|:..|||         |:.:.    ..|..|.....|..|
 Worm   136 PAASRSAG-----SNANTDRQSAGGS---------LISSS----DMNAPLGGIDQGQLMSLIQSL 182

  Fly   182 ---EEPPLPFA------DPDANTDTDTDTYTSESGI------------QTFD------------- 212
               ....||.:      |..:..|.:..|..:|.|.            |.|:
 Worm   183 QGGNSDTLPISSVPRGEDASSEADCEPSTNAAEEGSSNPLSLNNPAIQQIFNNLGRSQKKEVAVS 247

  Fly   213 LAAVLRLHGAEAVDKVLSCPSRREKLMAQLPKDHEAMDEQSDILEHLHSAQFYESLSSFSVGLHS 277
            ||..|   ..|.|.:|  ..:..|:|...||...   |...::.|.:.:.||.::..:....|.:
 Worm   248 LATAL---SNETVAEV--ARNHAEELAPHLPTSD---DPARELSETVRTPQFRQAADTLGHALQT 304

  Fly   278 GALRKSLEPLLQSDDNREA-LNAAQVGDVERFLRELERNDG 317
            |    .|.|::......|| :.:|..||:..|...|.:.:|
 Worm   305 G----QLGPVVAQFGMDEATVGSANQGDIRGFAANLTKAEG 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn13R	NP_572205.1	PH_Rpn13	10..115	CDD:270124	40/112 (36%)
		RPN13_C	204..312	CDD:293158	28/133 (21%)
rpn-13	NP_001348746.1	PH_Rpn13	19..128	CDD:270124	40/112 (36%)
		RPN13_C	243..333	CDD:374621	23/101 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160002
Domainoid	1	1.000	95	1.000	Domainoid score	I4654
eggNOG	1	0.900	-	-		E1_KOG3037
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1479349at2759
OrthoFinder	1	1.000	-	-		FOG0003818
OrthoInspector	1	1.000	-	-		otm14463
orthoMCL	1	0.900	-	-		OOG6_102724
Panther	1	1.100	-	-	O	PTHR12225
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2662
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	11	10.750