DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32767 and l(3)neo38

DIOPT Version :9

Sequence 1:NP_001162674.1 Gene:CG32767 / 31430 FlyBaseID:FBgn0052767 Length:1281 Species:Drosophila melanogaster
Sequence 2:NP_001262485.1 Gene:l(3)neo38 / 41423 FlyBaseID:FBgn0265276 Length:455 Species:Drosophila melanogaster


Alignment Length:627 Identity:124/627 - (19%)
Similarity:193/627 - (30%) Gaps:223/627 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 PPTAAAAAAAVAVAATTAATAAAATNNSASFSSNSSSSNSN-----NSNHLDNQQQLLIQQQQQQ 178
            ||.|||.|||       ||.||...|:...:.:|.:..|.|     .:|::...|.:.|...|.|
  Fly    32 PPAAAANAAA-------AAAAAGTDNHVQRYQTNGNHFNQNVPNVSAANNMQYGQNISIPYSQPQ 89

  Fly   179 QQHHLLNGRRIIIQATGNSSVLAASDIK-------EEDEEEEDPELNDENLQDIEEEAQA-AEAD 235
            ...:.||             ..||:|.|       |.|.||   .||.:.||::.:..|. |...
  Fly    90 GDLNFLN-------------AAAAADHKGKIHPKIERDREE---VLNQQILQNVNQSWQTLANTA 138

  Fly   236 EEPETTAHLSTQVKLELEEDDEMPDEEEEEDEDDDEELQHGQLEYQISAATQTAGAATSSAAGGA 300
            ...:.::|| ....|.:.....:...|..:.|...:.|::|    ...|:....|.|.:.:..||
  Fly   139 NTVDYSSHL-LSATLPISIQHFLKYSETIKKESTGDVLKNG----TNLASLALGGVALTPSNNGA 198

  Fly   301 ATAGGGSQQLVQLPAGSIVSTTTHRLSVPVTEAALVQLQRRPVYISNAVGGLTAGATYVRMPAAA 365
              .||....||.:..|..::..|......:|..|           ||.|.| .|..|.....|.|
  Fly   199 --NGGHHNGLVGMDHGGHMTNMTDANGAALTNGA-----------SNGVNG-NANGTVTNGGAGA 249

  Fly   366 VISRSPMTVLNVVQQALPATQLILQTQQQQTPAAAAAEQQLALALEQQRQQQEQQAQQQRQQQQQ 430
            |.|...:...|.               ...|..|:.                             
  Fly   250 VSSSGSVGTTNA---------------SGGTGTASG----------------------------- 270

  Fly   431 QEQQRQQQQQQQQQQQQQAQQEQQRQQQQQLQQQQQQQQTHPVKHSASGSSSTNNNSTTNSTNSN 495
                      ::.::::..::::.|.:..::::.:          :..||               
  Fly   271 ----------KKTKKKKPPKEKKPRPKPGEIRETK----------ALDGS--------------- 300

  Fly   496 NNTPAATATVTTSYQCVECVEKFDSKELFDIHRSGHA--NNMKCAICNMVLKSLKNYEKHCLRCK 558
                       |.|.|.||...:..:.|.:.|...||  ....|.|||..||.    :.|..|  
  Fly   301 -----------TLYCCPECQMAYPDRSLIEQHVISHAVERRFVCDICNAALKR----KDHLTR-- 348

  Fly   559 PYECQICGRVVRFRPNFIKHMRVHTGQQSERHKYKCEVCHKEFMSFEYFKVHKKIHNENVNLTCE 623
                                                               ||..|..:....|.
  Fly   349 ---------------------------------------------------HKLSHIPDRPHVCN 362

  Fly   624 ICGKVFSALASLRGHSKLHSGVKLHKCDVCGKGFGQRYNLKIHARTHTGDFPFECKICKKKLHTQ 688
            ||.|.|.....|..|..:|||.|.|.|..|||||.::.:|:.|.|:|..          :::.::
  Fly   363 ICMKSFKRKEQLTLHIVIHSGEKKHVCIECGKGFYRKDHLRKHTRSHIA----------RRVKSE 417

  Fly   689 SSLQTHMQVHLRDQPGAAAAAATAAGAASSKASNSSNSSNSS 730
            .|.|         ....:|......|..:|..||:.:.| .|
  Fly   418 VSAQ---------NVNGSAGGGGGGGGGNSAQSNALHGSXGS 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32767NP_001162674.1 C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 562..582 CDD:275368 0/19 (0%)
C2H2 Zn finger 594..614 CDD:275368 2/19 (11%)
C2H2 Zn finger 622..642 CDD:275368 7/19 (37%)
zf-C2H2 648..670 CDD:278523 10/21 (48%)
C2H2 Zn finger 650..670 CDD:275368 9/19 (47%)
zf-H2C2_2 662..684 CDD:290200 4/21 (19%)
C2H2 Zn finger 678..698 CDD:275368 2/19 (11%)
l(3)neo38NP_001262485.1 C2H2 Zn finger 305..325 CDD:275368 5/19 (26%)
zf-C2H2_8 306..391 CDD:292531 30/141 (21%)
C2H2 Zn finger 333..353 CDD:275368 10/76 (13%)
zf-H2C2_2 345..370 CDD:290200 10/77 (13%)
C2H2 Zn finger 361..381 CDD:275368 7/19 (37%)
zf-H2C2_2 374..398 CDD:290200 13/23 (57%)
C2H2 Zn finger 389..409 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2683
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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