DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32767 and ich

DIOPT Version :9

Sequence 1:NP_001162674.1 Gene:CG32767 / 31430 FlyBaseID:FBgn0052767 Length:1281 Species:Drosophila melanogaster
Sequence 2:NP_001262393.1 Gene:ich / 41069 FlyBaseID:FBgn0286204 Length:592 Species:Drosophila melanogaster


Alignment Length:753 Identity:129/753 - (17%)
Similarity:208/753 - (27%) Gaps:376/753 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 HVHHHHHSQHHPHSHSHQQQQQQHLQQQQQQQQHHHPHHHLKLDNSSNNHPPTAAAAAAAVAVAA 133
            |:..:..|.||.|:.:.:...:.:   ....|..:||      .|.||   ||            
  Fly    91 HLSINGISGHHYHAIAQRLPDESN---NNYMQSAYHP------QNQSN---PT------------ 131

  Fly   134 TTAATAAAATNNSASFSSNSSSSNSNNSNHLDNQQQLLIQQQQQQQQHHLLNGRRIIIQAT---- 194
                        |.:.|:..|:|||||||                 :|::::....:.::.    
  Fly   132 ------------STTQSNGGSNSNSNNSN-----------------EHNIVSSSTCLPESVLSGS 167

  Fly   195 -----GNSSVLAASDIKEEDEEEEDPEL---NDENLQDIEEEAQAAEA-------------DEEP 238
                 ||.:.||  |:|...:.:.|.:|   .|..:.:......||..             |:..
  Fly   168 GGGGGGNDACLA--DVKLFADSQLDSKLYSVADSCVMNGSGSGSAANGNGSGPSIATLTPIDQVA 230

  Fly   239 ETTAHLSTQVKLELEE-------------------DDEMPDEEEEEDEDDDEE------------ 272
            ::..:...::..:|.|                   |..:|::.:::|.:|..:            
  Fly   231 DSLHNSGVRIYKDLTEYVDMNSIDDIAAIIGSAIADTTVPNQLDKDDNNDTRDSWMDLDAWIDGN 295

  Fly   273 ---------------------LQHGQLEYQISAATQTA------------------GAATSSAAG 298
                                 |.|..|....|::|..:                  ....||..|
  Fly   296 CIQQESAKVLVSQQDSLGDFILPHSPLPMHASSSTLQSLLSHGYMPLLQNRLQNGPPNGNSSGGG 360

  Fly   299 GAATAGGGSQQLVQLPA-------------------GSIVSTTTHRLSVPVTEAALVQLQRRPVY 344
            |.|..|.|.:...|.|.                   ||:||||.:...:.:          .|.|
  Fly   361 GGANQGAGIKGDPQAPTSTSYCNELAAATSSSCSPPGSVVSTTDNPNGLMI----------NPRY 415

  Fly   345 ISN-----AVGGLTAGATYVRMPAAAVISRSPMTVLNVVQQALPATQLILQTQQQQTPAAAAAEQ 404
            :||     |.|.|.....| .|.|:.         |::....|.:..|:.......|.:...:|.
  Fly   416 LSNPTNNQATGNLHQQGGY-SMQASG---------LSLKDNGLCSPDLLGNYPHTTTASTTGSEM 470

  Fly   405 QLALALEQQRQQQEQQAQQQRQQQQQQEQQRQQQQQQQQQQQQQAQQEQQRQQQQQLQQQQQQQQ 469
            :..             |.:.::.:.|::..:||||||||||||                      
  Fly   471 RTG-------------APKAKRSRSQKKSNQQQQQQQQQQQQQ---------------------- 500

  Fly   470 THPVKHSASGSSSTNNNSTTNSTNSNNNTPAATATVTTSYQCVECVEKFDSKELFDIHRSGHANN 534
                  ...|...|              ||..:|                      |..||    
  Fly   501 ------GDGGGQPT--------------TPQMSA----------------------ISPSG---- 519

  Fly   535 MKCAICNMVLKSLKNYEKHCLRCKPYECQICGRVVRFRPNFIKHMRVHTGQQSERHKYKCEVCHK 599
                                                                             
  Fly   520 ----------------------------------------------------------------- 519

  Fly   600 EFMSFEYFKVHKKIHNENVNLTCEICGKVFSA--LASLRGHSKLHSGVKLHKCDVCGKGFGQRYN 662
                                         |||  |:.|.|..|     .:|:|.:|.:||..:.|
  Fly   520 -----------------------------FSASDLSGLLGKEK-----PVHRCSICNRGFLNKSN 550

  Fly   663 LKIHARTHTGDFPFECKICKKKLHTQSSLQTHMQVHLR 700
            :|:|.|||||:.||.|.:|.|....::.|..|.|:|.|
  Fly   551 IKVHLRTHTGEKPFRCDVCAKAFRQKAHLLKHQQIHKR 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32767NP_001162674.1 C2H2 Zn finger 537..557 CDD:275368 0/19 (0%)
C2H2 Zn finger 562..582 CDD:275368 0/19 (0%)
C2H2 Zn finger 594..614 CDD:275368 0/19 (0%)
C2H2 Zn finger 622..642 CDD:275368 7/21 (33%)
zf-C2H2 648..670 CDD:278523 9/21 (43%)
C2H2 Zn finger 650..670 CDD:275368 8/19 (42%)
zf-H2C2_2 662..684 CDD:290200 12/21 (57%)
C2H2 Zn finger 678..698 CDD:275368 6/19 (32%)
ichNP_001262393.1 C2H2 Zn finger 538..558 CDD:275368 8/19 (42%)
zf-H2C2_2 550..575 CDD:316026 13/24 (54%)
C2H2 Zn finger 566..586 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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