DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32767 and Zfp956

DIOPT Version :9

Sequence 1:NP_001162674.1 Gene:CG32767 / 31430 FlyBaseID:FBgn0052767 Length:1281 Species:Drosophila melanogaster
Sequence 2:XP_006236479.1 Gene:Zfp956 / 312301 RGDID:1304879 Length:573 Species:Rattus norvegicus


Alignment Length:705 Identity:136/705 - (19%)
Similarity:219/705 - (31%) Gaps:244/705 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 IQQQQQQQQHHLLNGRRIIIQATGNSSVLAASDIKEEDEEEEDPELNDENLQDIEEEAQAAEADE 236
            :|||.|             ||.|..|.:...:.|:..:::.|...::.:||:.....|:....|.
  Rat    16 LQQQAQ-------------IQCTETSLLALLAAIQAVEKKTESQGIHLQNLEVRTGSAEKKLTDF 67

  Fly   237 EPETTAHLSTQV-------------------KLELEED-----------------DE-------- 257
            | :|...||:|:                   :||..|:                 ||        
  Rat    68 E-KTAVELSSQLEGKWAVLGTLLQEYGLLQRRLENLENQMQNRNPWVLRLPPSSKDEAPKVSVIT 131

  Fly   258 ------MPDEEEEEDEDDDEEL-QHGQLEYQISAATQTAGAATSSAAGGAATAGGGSQQLVQLPA 315
                  .|:::|...||..:|| :|                                        
  Rat   132 EEVTGCFPEQQEGSPEDWQKELCKH---------------------------------------- 156

  Fly   316 GSIVSTTTHRLSVPVTEAALVQLQRRPVYISNAVGGLTAGATYVRMPAAAVISRSPMTVLNVVQQ 380
                                |..:||.|     :|.|..|..           .|..:||..::|
  Rat   157 --------------------VAKERREV-----LGSLETGQL-----------ESAPSVLPWIKQ 185

  Fly   381 ALPATQLILQTQQQQTPAAAAAEQQLA----------LALEQQRQQQEQQAQQQRQQQQQ----- 430
               ..::..::.|:.|.|:..:|..||          ||.|.....:....::...:|..     
  Rat   186 ---EEEVCEKSLQETTSASLCSETWLANKKRTLEGMSLAPEPSWVTEGGPGKEDFSEQGTCGDLL 247

  Fly   431 ---QEQQRQQQQQQQQQQQQQAQQEQQRQQQQQLQQQQQQQQTHPVKHSASGSSSTNNNSTTNST 492
               :|::.....:..|.|...|.:..:..|...:|:..:|     :::|..||....:.....|.
  Rat   248 PVCREREASSLPRGSQSQSVSAAEGTENGQNFNVQELSKQ-----LEYSHHGSQPFASLQCPQSA 307

  Fly   493 ------NSNNNTPAATATVTTSYQCVECVEKFDSKELFDIHRSGHANNMKCAICNMVLKSLKNYE 551
                  ..|...|||    ..:|.||:|.:.|..:.....|...|...                 
  Rat   308 AQQVTLTRNRRAPAA----QRAYTCVQCGKSFVHQSTLTTHYRTHTGE----------------- 351

  Fly   552 KHCLRCKPYECQICGRVVRFRPNFIKHMRVHTGQQSERHKYKCEVCHKEFMSFEYFKVHKKIHNE 616
                  |||:|..|.:........::|.|.|||::    .:.|..|.:.|........|::.|..
  Rat   352 ------KPYKCAECEKRFGRLSTLLEHQRTHTGER----PFPCAQCGRRFGRLSTLVEHRRTHTG 406

  Fly   617 NVNLTCEICGKVFSALASLRGHSKLHSGVKLHKCDVCGKGFGQRYNLKIHARTHTGDFPFECKIC 681
            .....|..|.|.|:.||:|..|..:|||....:|..||..|..:.:...|.|:|:.:..|.|..|
  Rat   407 EKPFPCTQCDKRFTRLANLTVHQSVHSGEHAFQCTQCGSCFTHKPSFLRHLRSHSQEKRFTCGQC 471

  Fly   682 KKKLHTQSSLQTHMQVHLRDQPGAAAAAATAAGAASSKASNS--------SNSSNSSNSSSSNSS 738
            .|....:|.|..|...|        |.:|::|..|..::|.|        ..|:....||..:.|
  Rat   472 GKSFTCRSWLVRHQSSH--------AHSASSAYVACERSSPSYVPPTGLFKGSARGKFSSDPSVS 528

  Fly   739 SNGVSAAVSAATTTTTIVKLEPPHEIERPGTSSNQQLQQSQHHQMELDDQSGLSG 793
            .......||.                :.......|||  |.|      ||..|.|
  Rat   529 PRSKDTRVSQ----------------DHKAYGGGQQL--SDH------DQESLVG 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32767NP_001162674.1 C2H2 Zn finger 537..557 CDD:275368 0/19 (0%)
C2H2 Zn finger 562..582 CDD:275368 4/19 (21%)
C2H2 Zn finger 594..614 CDD:275368 4/19 (21%)
C2H2 Zn finger 622..642 CDD:275368 8/19 (42%)
zf-C2H2 648..670 CDD:278523 6/21 (29%)
C2H2 Zn finger 650..670 CDD:275368 6/19 (32%)
zf-H2C2_2 662..684 CDD:290200 6/21 (29%)
C2H2 Zn finger 678..698 CDD:275368 6/19 (32%)
Zfp956XP_006236479.1 C2H2 Zn finger 302..320 CDD:275368 2/17 (12%)
zf-C2H2 326..348 CDD:395048 6/21 (29%)
C2H2 Zn finger 328..348 CDD:275368 5/19 (26%)
zf-H2C2_2 341..365 CDD:404364 7/46 (15%)
C2H2 Zn finger 356..376 CDD:275368 4/19 (21%)
COG5048 380..>445 CDD:227381 18/68 (26%)
C2H2 Zn finger 384..404 CDD:275368 4/19 (21%)
zf-H2C2_2 397..421 CDD:404364 6/23 (26%)
C2H2 Zn finger 412..432 CDD:275368 8/19 (42%)
C2H2 Zn finger 440..460 CDD:275368 6/19 (32%)
zf-H2C2_2 455..477 CDD:404364 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24393
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.