DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ovo and hb

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster


Alignment Length:485 Identity:94/485 - (19%)
Similarity:147/485 - (30%) Gaps:163/485 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   841 HHQQHGVQQQQQQQHSVQQQQQHNVQQQHGVQQQHVQQQPPPSYQHATRGLMMQQQPQHGGYQQQ 905
            :::||..........:::|:..|::.........  :|.|.||..|..:.|..|||         
  Fly    11 NYEQHNAWYNSMFAANIKQEPGHHLDGNSVASSP--RQSPIPSTNHLEQFLKQQQQ--------- 64

  Fly   906 AAIMSQQQQQ----LLSQQQQQSHHQQQQQQQHAAAYQQHNIYAQQQQQQQQQHHQQQQQQQHHH 966
                 |.|||    |.:.....|.:.|...|.:.|..||     |..||||.|.|.|..||||||
  Fly    65 -----QLQQQPMDTLCAMTPSPSQNDQNSLQHYDANLQQ-----QLLQQQQYQQHFQAAQQQHHH 119

  Fly   967 FHH--------QQQQQPQPQSHHSHHHGHGHDNSNMSLPSPTAAAAAAAAAAAAAAAAAAHLQRP 1023
            .||        .....|.|..|.       :..:....|.||..:|:..|..|.|..::..||  
  Fly   120 HHHLMGGFNPLTPPGLPNPMQHF-------YGGNLRPSPQPTPTSASTIAPVAVATGSSEKLQ-- 175

  Fly  1024 MSSSSSSGGTNSSNSSGGSSNSPLLDANAAAAAAAALLDTKPLIQSLGLPPDLQLEFVNGGHGIK 1088
                               :.:|.:|..                     ||             |
  Fly   176 -------------------ALTPPMDVT---------------------PP-------------K 187

  Fly  1089 NPLAVENAHGGHHRIRNIDCIDDLSKHGHHSQHQQQQGSPQQQNMQQSVQQQSVQQQQSLQQQQQ 1153
            :|                            ::..|....|::::.|.|         .|.:..:.
  Fly   188 SP----------------------------AKSSQSNIEPEKEHDQMS---------NSSEDMKY 215

  Fly  1154 QQHHQHHSNSSASSNASSHGSAEALCMGSSGGANEDSSSGNNKFVCRVCMKTFSLQRLLNRHMKC 1218
            ....:....:......:|||..:                   .:.|:.|......:.....|.:.
  Fly   216 MAESEDDDTNIRMPIYNSHGKMK-------------------NYKCKTCGVVAITKVDFWAHTRT 261

  Fly  1219 HSDIKRYL-CTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQY 1282
            |....:.| |..|.........|:.|.|.|...:|::|:.|..:...:..|.|| :|.||..:||
  Fly   262 HMKPDKILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKCSYTCVNKSMLNSH-RKSHSSVYQY 325

  Fly  1283 AYKERRAKMYVCEECGHTTCEPEVHYLHLK 1312
            .          |.:|.:.|.......|||:
  Fly   326 R----------CADCDYATKYCHSFKLHLR 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 3/19 (16%)
zf-H2C2_2 1212..1235 CDD:290200 5/23 (22%)
C2H2 Zn finger 1227..1247 CDD:275368 5/19 (26%)
zf-H2C2_2 1239..1264 CDD:290200 7/24 (29%)
C2H2 Zn finger 1255..1276 CDD:275368 6/20 (30%)
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 3/19 (16%)
C2H2 Zn finger 271..291 CDD:275368 5/19 (26%)
zf-H2C2_2 283..308 CDD:290200 7/24 (29%)
C2H2 Zn finger 299..319 CDD:275368 6/20 (30%)
C2H2 Zn finger 327..345 CDD:275368 5/17 (29%)
C2H2 Zn finger 707..727 CDD:275371
C2H2 Zn finger 735..757 CDD:275371
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464957
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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