DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and Zbtb48

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:XP_038966377.1 Gene:Zbtb48 / 362668 RGDID:1311581 Length:739 Species:Rattus norvegicus


Alignment Length:575 Identity:105/575 - (18%)
Similarity:188/575 - (32%) Gaps:158/575 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   778 DDEESTSPRQDFELVSTPSLTPDS-----VTPVEQHNTNTTQLDVLHENLLTQLTHNIVR----- 832
            :.|:|..|.:.||....| |..:|     |..||.............|.:||:....::|     
  Rat   199 ESEDSKEPPRPFEAEGAP-LQGESNEWEVVVQVEDDRDGDGDYASEPETVLTRRKSKVIRKPCAA 262

  Fly   833 -----GGSNQQQQHHQQHG--VQQQQQQQH----SVQQQQQHNVQQQHGVQQQHVQQQPPPSYQH 886
                 .||...:....:.|  |..:....|    |....:.||        ::|..::|      
  Rat   263 EPALGAGSLTAEPTEGRKGAAVPVECPTCHKKFLSKYYLKVHN--------RKHTGEKP------ 313

  Fly   887 ATRGLMMQQQPQHGG-YQQQAAIMSQQQQQLLSQQQ--------QQSHHQQQQQQQHAAAYQQHN 942
                   .:.|:.|. |.::..::..:.:..:::.:        |::..::.:.:.|..::....
  Rat   314 -------FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRVHMVSHTGEM 371

  Fly   943 IYAQQQQQQQQQHHQQQQQQQHHHFHHQQQQQPQPQSHHSHHHGHGHDNSNMSLPSPTAAAAAAA 1007
            .|......|                  |..|:...|||....||         .|.|.|.:|...
  Rat   372 PYKCSSCSQ------------------QFMQKKDLQSHMIKLHG---------APKPHAVSAKQG 409

  Fly  1008 AAAAA--AAAAAAHLQR---PMSSSSSSGGTNSSNSSGGS----------SNSPLLDANAAAAAA 1057
            ..:..  .|....||..   |:|.|.|:....|::..|.|          ..|.|...|......
  Rat   410 WGSCGPWTAQPCPHLDSLPLPVSPSCSAPLVPSASCLGRSYSCTRLLSIVEKSSLCVKNVGTGPQ 474

  Fly  1058 AAL---LDTKPLIQSLGLPPDLQLEFVNGGHGIKNPLAVENA--HGGHHRIRNIDCIDDLSKHGH 1117
            ||:   ..::|                  ..|:|..::|.:|  |..........|.        
  Rat   475 AAMGCRCTSRP------------------STGMKGRMSVSSAAMHSPRRPTSTCTCA-------- 513

  Fly  1118 HSQHQQQQ-----GSPQQQNMQQSVQQQSVQQQQSLQQQQQQQHHQHHSNSSASSNASSHGSAEA 1177
            |:|.:...     |.|....::|:....:...:|.|.           |..|.:::...|..   
  Rat   514 HTQERSPSSATSVGRPSAPKVRQARPLLASGLRQVLS-----------STLSPTASLDKHNR--- 564

  Fly  1178 LCMGSSGGANEDSSSGNNKFVCRVCMKTFSLQRLLNRHMKC-HSDIKRYLCTFCGKGFNDTFDLK 1241
                        :.:|...|.|..|.:.|:.:..|.||:.. |.:.:.:.|..|||.|.....|:
  Rat   565 ------------THTGERPFSCEFCEQRFTEKGPLLRHVASRHQEGRPHFCQICGKTFKAVEQLR 617

  Fly  1242 RHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEE 1296
            .|.|.|.|||.::|..|...||::..|..| .::|.....|..::|:.:..:.::
  Rat   618 VHVRRHKGVRKFECTECGYKFTRQAHLRRH-MEIHDRVENYNPRQRKLRNLIIDD 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 6/20 (30%)
zf-H2C2_2 1212..1235 CDD:290200 8/23 (35%)
C2H2 Zn finger 1227..1247 CDD:275368 8/19 (42%)
zf-H2C2_2 1239..1264 CDD:290200 10/24 (42%)
C2H2 Zn finger 1255..1276 CDD:275368 6/20 (30%)
Zbtb48XP_038966377.1 BTB_POZ_ZBTB48_TZAP_KR3 8..115 CDD:349541
C2H2 Zn finger 288..308 CDD:275368 4/27 (15%)
zf-H2C2_2 300..323 CDD:404364 6/43 (14%)
C2H2 Zn finger 316..367 CDD:275368 5/50 (10%)
zf-C2H2 345..367 CDD:395048 2/21 (10%)
zf-H2C2_2 359..382 CDD:404364 3/40 (8%)
C2H2 Zn finger 375..396 CDD:275368 6/38 (16%)
C2H2 Zn finger 574..595 CDD:275368 6/20 (30%)
C2H2 Zn finger 603..623 CDD:275368 8/19 (42%)
zf-H2C2_2 616..640 CDD:404364 10/23 (43%)
zf-C2H2 629..651 CDD:395048 6/22 (27%)
C2H2 Zn finger 631..651 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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