DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and hic1l

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:NP_571558.2 Gene:hic1l / 30771 ZFINID:ZDB-GENE-030620-1 Length:454 Species:Danio rerio


Alignment Length:343 Identity:74/343 - (21%)
Similarity:125/343 - (36%) Gaps:94/343 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1025 SSSSSSGGTNSSNSSGGSSNSPLLDANAAAAAAAALLDTKPLIQ-------------SLGLPPDL 1076
            ||..:..|:.:|....|:|:|.||..:.::...|....|.|..:             .|||  ||
Zfish   113 SSKINQNGSVNSLYCFGTSSSVLLYEDHSSDTEAYTSITPPKKRQNAGRRYNSKNKLDLGL--DL 175

  Fly  1077 QLEFVNGGHGIKNPLAVENAHGGHHRI--RNIDCI---DDLSKHGHHSQHQQQQGSPQQQNM--- 1133
            .....|....:.:.|::......|.:|  :.: |.   :.|.|....:|.::::.|.::.|.   
Zfish   176 SKRKSNLEKTVTDELSLSKTISNHKQIGTKGV-CFPKEEKLIKPLDGAQERKRERSQRKSNFNGC 239

  Fly  1134 -------------QQSVQQQSVQQQQSLQQQQQQQHHQH-------------------------- 1159
                         |....|.||::::.::.:..:...|:                          
Zfish   240 IPLCRVGSQLSQNQTFTFQMSVKKEEDIEGKTDETDGQNPIGCTNFVYQKETFVKDAGIDNRYVC 304

  Fly  1160 -------HSNSSASSNASSH----------GSAEALCMG---SSGGANEDSSSGNNK-------- 1196
                   .|:.|..|:..||          ...|....|   .|..|.|......||        
Zfish   305 IPCEKGFPSSESLKSHVESHFDDDLDVRVEDEEEEESDGVTRISKEAPEHLEPSPNKSLKDVDLL 369

  Fly  1197 --FVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCE 1259
              |.|.:|.|.|:.:..:.|||:.|..:|.:.|..||..|...:.|..|.|.|:|.:||.|.:|.
Zfish   370 RPFPCNICGKMFTQRGTMTRHMRSHLSLKPFACEECGMRFTRQYRLTEHMRVHSGEKPYACQVCG 434

  Fly  1260 KSFTQRCSLESHCQKVHS 1277
            ..|||:.:|.|| .::|:
Zfish   435 GKFTQQRNLISH-MRMHT 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 7/19 (37%)
zf-H2C2_2 1212..1235 CDD:290200 8/22 (36%)
C2H2 Zn finger 1227..1247 CDD:275368 7/19 (37%)
zf-H2C2_2 1239..1264 CDD:290200 10/24 (42%)
C2H2 Zn finger 1255..1276 CDD:275368 8/20 (40%)
hic1lNP_571558.2 BTB 18..119 CDD:306997 2/5 (40%)
C2H2 Zn finger 304..324 CDD:275368 3/19 (16%)
zf-C2H2 372..394 CDD:306579 8/21 (38%)
C2H2 Zn finger 374..394 CDD:275368 7/19 (37%)
zf-H2C2_2 387..411 CDD:316026 9/23 (39%)
C2H2 Zn finger 402..422 CDD:275368 7/19 (37%)
zf-H2C2_2 414..439 CDD:316026 10/24 (42%)
C2H2 Zn finger 430..450 CDD:275368 8/20 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 101 1.000 Inparanoid score I4977
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.050

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