DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and si:cabz01063885.1

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:XP_009299352.1 Gene:si:cabz01063885.1 / 103911018 ZFINID:ZDB-GENE-161017-66 Length:284 Species:Danio rerio


Alignment Length:144 Identity:45/144 - (31%)
Similarity:69/144 - (47%) Gaps:20/144 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1192 SGNNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCN 1256
            :|.....|:||.|:|:....|..|::.|:..:.|.|:.|||.|..:.....|.|.|||.:|:||:
Zfish   133 TGEMSLTCKVCGKSFTSIYNLKSHLRTHTRERPYKCSHCGKAFMSSGARCAHIRIHTGEKPFKCS 197

  Fly  1257 LCEKSFTQRCSLESHCQKVHSVQHQYA------------YKERRAKM------YVCEECGHTTCE 1303
            ||.:|||||.:|.|| :.||:.:..::            |.:|..|:      :.|..||.....
Zfish   198 LCGRSFTQRSALASH-KTVHTGEKPFSCKACGKSFTAKRYLQRHVKLHTRVQPFTCGRCGKGFLN 261

  Fly  1304 PEVHYLHLKNNHPF 1317
             :..|.|.....||
Zfish   262 -KSSYQHHMEERPF 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 7/19 (37%)
zf-H2C2_2 1212..1235 CDD:290200 8/22 (36%)
C2H2 Zn finger 1227..1247 CDD:275368 7/19 (37%)
zf-H2C2_2 1239..1264 CDD:290200 12/24 (50%)
C2H2 Zn finger 1255..1276 CDD:275368 11/20 (55%)
si:cabz01063885.1XP_009299352.1 C2H2 Zn finger 84..104 CDD:275368
COG5048 <109..268 CDD:227381 42/136 (31%)
C2H2 Zn finger 112..132 CDD:275368
zf-C2H2 139..160 CDD:278523 7/20 (35%)
C2H2 Zn finger 140..160 CDD:275368 7/19 (37%)
zf-H2C2_2 152..175 CDD:290200 8/22 (36%)
C2H2 Zn finger 168..188 CDD:275368 7/19 (37%)
zf-H2C2_2 184..205 CDD:290200 12/20 (60%)
C2H2 Zn finger 196..216 CDD:275368 11/20 (55%)
zf-H2C2_2 208..232 CDD:290200 5/24 (21%)
C2H2 Zn finger 224..244 CDD:275368 3/19 (16%)
C2H2 Zn finger 252..269 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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