DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and ovol3

DIOPT Version :10

Sequence 1:NP_726971.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:XP_017952413.1 Gene:ovol3 / 101730693 XenbaseID:XB-GENE-919969 Length:206 Species:Xenopus tropicalis


Alignment Length:132 Identity:80/132 - (60%)
Similarity:97/132 - (73%) Gaps:0/132 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly  1197 FVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKS 1261
            |.||.|.|.|.|||:|.||.||||..||:.|..|.||||||||||||.|||||:|||||.:|:||
 Frog    55 FSCRACRKCFPLQRMLTRHQKCHSIQKRHHCPCCSKGFNDTFDLKRHMRTHTGIRPYKCPVCDKS 119

  Fly  1262 FTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECGHTTCEPEVHYLHLKNNHPFSPALLKFYD 1326
            ||||||||||.:|:|.:...|||::||:|:|||||||.|:...:.:.||:...||.:|.|.|...
 Frog   120 FTQRCSLESHLRKIHGILQNYAYRQRRSKIYVCEECGFTSPNADNYTLHVVEVHPNNPLLSKNLR 184

  Fly  1327 KR 1328
            ||
 Frog   185 KR 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_726971.1 C2H2 Zn finger 1199..1219 CDD:275368 12/19 (63%)
zf-H2C2_2 1212..1235 CDD:463886 13/22 (59%)
C2H2 Zn finger 1227..1247 CDD:275368 15/19 (79%)
zf-H2C2_2 1239..1264 CDD:463886 19/24 (79%)
C2H2 Zn finger 1255..1276 CDD:275368 15/20 (75%)
ovol3XP_017952413.1 C2H2 Zn finger 57..77 CDD:275368 12/19 (63%)
COG5048 <78..>150 CDD:227381 48/71 (68%)
C2H2 Zn finger 85..105 CDD:275368 15/19 (79%)
zf-H2C2_2 97..122 CDD:463886 19/24 (79%)
C2H2 Zn finger 113..134 CDD:275368 15/20 (75%)
zf_C2H2_ZHX 149..195 CDD:465737 17/38 (45%)
C2H2 Zn finger 152..169 CDD:275368 7/16 (44%)

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