DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and ovol1

DIOPT Version :10

Sequence 1:NP_726971.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:XP_004913743.1 Gene:ovol1 / 100495817 XenbaseID:XB-GENE-5964939 Length:247 Species:Xenopus tropicalis


Alignment Length:210 Identity:98/210 - (46%)
Similarity:124/210 - (59%) Gaps:24/210 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1137 VQQQSVQQQQSLQQQQQQQHHQHHSNSSASSNASSHGSAEALCMGSSGGANEDSSSGNNK----- 1196
            :||::..:..:.:......||....::|.|...:.             |..|.:....:|     
 Frog    40 LQQKAEPELDNEEALDLSLHHLRCVSNSPSCQVTE-------------GRQEQAPGTQDKVPMIQ 91

  Fly  1197 ------FVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKC 1255
                  |.|.:|.|:||.||:|||||||||::||:.|..||||||||||||||.|||||||||||
 Frog    92 GEQRLLFHCALCEKSFSFQRMLNRHMKCHSEVKRHRCEHCGKGFNDTFDLKRHVRTHTGVRPYKC 156

  Fly  1256 NLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECGHTTCEPEVHYLHLKNNHPFSPA 1320
            :||||:||||||||||.:|:|.||..|||||||.|:||||:||.|....|....||::.||.||.
 Frog   157 HLCEKAFTQRCSLESHLKKIHGVQQNYAYKERRTKLYVCEDCGFTADSQESQLHHLQDQHPTSPL 221

  Fly  1321 LLKFYDKRHFKFTNS 1335
            |.:...|......||
 Frog   222 LNRTSKKLAVVLQNS 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_726971.1 C2H2 Zn finger 1199..1219 CDD:275368 13/19 (68%)
zf-H2C2_2 1212..1235 CDD:463886 16/22 (73%)
C2H2 Zn finger 1227..1247 CDD:275368 16/19 (84%)
zf-H2C2_2 1239..1264 CDD:463886 21/24 (88%)
C2H2 Zn finger 1255..1276 CDD:275368 16/20 (80%)
ovol1XP_004913743.1 COG5048 <45..186 CDD:227381 72/153 (47%)
C2H2 Zn finger 100..120 CDD:275368 13/19 (68%)
zf-H2C2_2 112..136 CDD:463886 16/23 (70%)
C2H2 Zn finger 128..148 CDD:275368 16/19 (84%)
zf-H2C2_2 140..165 CDD:463886 21/24 (88%)
C2H2 Zn finger 156..177 CDD:275368 16/20 (80%)

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