DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and znf1147

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:NP_001108581.1 Gene:znf1147 / 100141494 ZFINID:ZDB-GENE-080218-13 Length:260 Species:Danio rerio


Alignment Length:230 Identity:63/230 - (27%)
Similarity:94/230 - (40%) Gaps:71/230 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1136 SVQQQSVQQQQSLQQQQQQQHHQHH----------------SNSSASSNASSHGSAEALCMGSSG 1184
            :|:|:.:|:|......:::.|.|:.                ...:.:....|||..         
Zfish    18 TVKQEDLQEQSDRMVLKEETHGQNEIDEKWQFEKPQEITTDEKPTLTKKTLSHGRP--------- 73

  Fly  1185 GANEDSSSGNNKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTG 1249
               ..|.||.| |.|::|.|:||.:..|:.||:.|:..|.|.|..||:.|:....||.|.|.|||
Zfish    74 ---RKSKSGCN-FSCKLCSKSFSQKSNLDVHMRVHTGEKPYTCEQCGQSFSQKQCLKTHMRIHTG 134

  Fly  1250 VRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECG---------------H 1299
            .:|:.|..|.|||:|:.:|:.| .:||:.:          |.|.||:||               |
Zfish   135 EKPFSCKQCGKSFSQKPNLDIH-MRVHTGE----------KPYTCEQCGKSFSQKQSFKSHMRIH 188

  Fly  1300 T-----TCEP-----------EVHYLHLKNNHPFS 1318
            |     ||:.           |||........|||
Zfish   189 TGERPYTCQQCGKSFRHARNLEVHMRIHTGEKPFS 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 8/19 (42%)
zf-H2C2_2 1212..1235 CDD:290200 9/22 (41%)
C2H2 Zn finger 1227..1247 CDD:275368 8/19 (42%)
zf-H2C2_2 1239..1264 CDD:290200 13/24 (54%)
C2H2 Zn finger 1255..1276 CDD:275368 8/20 (40%)
znf1147NP_001108581.1 zf-C2H2 82..104 CDD:278523 9/21 (43%)
C2H2 Zn finger 84..104 CDD:275368 8/19 (42%)
COG5048 <86..257 CDD:227381 48/149 (32%)
zf-H2C2_2 96..121 CDD:290200 10/24 (42%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
zf-H2C2_2 125..149 CDD:290200 13/23 (57%)
C2H2 Zn finger 140..160 CDD:275368 8/20 (40%)
zf-H2C2_2 152..177 CDD:290200 10/35 (29%)
C2H2 Zn finger 168..188 CDD:275368 4/19 (21%)
zf-H2C2_2 180..205 CDD:290200 4/24 (17%)
C2H2 Zn finger 196..216 CDD:275368 4/19 (21%)
zf-H2C2_2 208..230 CDD:290200 6/16 (38%)
C2H2 Zn finger 224..244 CDD:275368 63/230 (27%)
zf-H2C2_2 236..259 CDD:290200
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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