DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and Zkscan16

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:NP_001092793.1 Gene:Zkscan16 / 100041581 MGIID:3510405 Length:728 Species:Mus musculus


Alignment Length:683 Identity:123/683 - (18%)
Similarity:237/683 - (34%) Gaps:187/683 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   681 IILKDEPD------IEYDEAKIDIGTFAQNIIQATMGSSGQFNASAYEDAIMSDLASSGQCPNGA 739
            :::...||      :.:::..:|.......:::.:       ....|::.::.:|.:        
Mouse   156 VVVMASPDPEPRESVTFEDVSVDFSRGEWKLLEPS-------QRELYKEVLLENLGT-------- 205

  Fly   740 VDPLQFTATLMLSSQTDHLLEQLSDAVDLSSFLQRSCVDDEESTSPRQDFELVSTPSLTPDSVTP 804
               |:|..:.:  |:.| |:..|. .|.|...|::..:.|     ||.. |||            
Mouse   206 ---LEFLGSPV--SKLD-LISHLK-WVKLPRVLEKEILKD-----PRPG-ELV------------ 245

  Fly   805 VEQHNTNTTQLDVLHENL-LTQLTHNIVRGGSNQQQQHHQQHGVQQQQQQQHSVQQQQQHNVQQQ 868
              :.:.:..:||...|.| |.:......|.|.         :|::.:.|::|.       ..::.
Mouse   246 --KESESRRELDAFMEGLTLEKTVEYCFRDGG---------YGLKTEFQRRHG-------KPKKD 292

  Fly   869 HGVQQQHVQQQPPPSYQHATRGLMMQQQPQHGGYQQQAAIMSQQQQQLLSQQQQQSHHQQQQQQQ 933
            ||.:..|..:      :..|.|      ...|...:|.:...:.::..||:..|:|...::....
Mouse   293 HGKRSSHENR------ESETEG------TSSGKRVKQTSDTLKHRKASLSKMSQRSKEGKKPFSF 345

  Fly   934 HAAAYQQHNIYAQQQQQQQQQHHQQQQQQQHHHFHHQQQQQPQPQSHHSHHHGHGHDNSNMSLPS 998
            |:|...:..:    ::::.::..:.::..:.|....::::.|:..|              :|...
Mouse   346 HSALVNRREL----RREKSRKCGEPEKDPRRHLSPAERKRHPKIGS--------------LSKTE 392

  Fly   999 PTAAAAAAAAAAAAAAAAAAHLQR----------------PMSSSSSSGGTNSSNSSGGSSNSPL 1047
            ..:....|..........::..::                |....:|..|........|:..|..
Mouse   393 TCSKCGVAFTQILENCIESSQCEKCRKNLFQDEAPNQDKEPDPEEASKCGKCGKAFEPGTKRSVC 457

  Fly  1048 LDANAAAAAAAALLDTKPLIQSLGLPPD---------------LQLEFVNGGHGIKNPLAVENAH 1097
            |:...|..|:|:   .||..::     |               .:|.|:.  |.       :..|
Mouse   458 LECRKAPKASAS---PKPHNKA-----DRKEKRYKCDECGKRFAELYFLT--HH-------QRTH 505

  Fly  1098 GGHHRIRNIDCIDDLSKHGHHSQHQQQQGSPQQQNMQQSVQQQSVQQQQSLQQQQQQQHHQHHS- 1161
            .|........|....|.:....|||:.....:....::.  .:|.....||     .:|.:.|: 
Mouse   506 TGEKPYVCKHCGRPFSDYSSFYQHQRIHTGEKPYTCKEC--GKSFTHSSSL-----SKHQRIHTG 563

  Fly  1162 ---------------NSSASSNASSH-GSAEALC--------MGSSGGANEDSSSGNNKFVCRVC 1202
                           ||..:.:...| |....||        :.||...::...:|...:.|..|
Mouse   564 EKPYKCNECGKAFRQNSCLTRHQKIHTGEKPFLCKDCGLSFRLFSSIMYHQRLHAGEKPYKCTHC 628

  Fly  1203 MKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCS 1267
            .|.|.....|:||::||:..|.|.|..|||.|..:..|..|.|||||.:||||:.|..:||:...
Mouse   629 EKGFPSHSRLSRHLRCHTGAKPYKCKECGKTFRQSSSLNLHIRTHTGEKPYKCDYCGAAFTRSTI 693

  Fly  1268 LESHCQKVHSVQHQYAYKERRAKMYVCEECGHT 1300
            |..|.:...:||            |.|::||.|
Mouse   694 LIEHVKTHTNVQ------------YECKKCGKT 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 7/19 (37%)
zf-H2C2_2 1212..1235 CDD:290200 11/22 (50%)
C2H2 Zn finger 1227..1247 CDD:275368 8/19 (42%)
zf-H2C2_2 1239..1264 CDD:290200 13/24 (54%)
C2H2 Zn finger 1255..1276 CDD:275368 6/20 (30%)
Zkscan16NP_001092793.1 SCAN 45..132 CDD:366881
KRAB 170..223 CDD:214630 8/73 (11%)
PRK07219 <383..489 CDD:235971 16/127 (13%)
C2H2 Zn finger 457..477 CDD:275368 6/27 (22%)
COG5048 <462..608 CDD:227381 27/169 (16%)
C2H2 Zn finger 485..505 CDD:275368 3/28 (11%)
C2H2 Zn finger 513..533 CDD:275368 5/19 (26%)
COG5048 <537..725 CDD:227381 53/197 (27%)
C2H2 Zn finger 541..561 CDD:275368 4/26 (15%)
C2H2 Zn finger 569..589 CDD:275368 2/19 (11%)
C2H2 Zn finger 597..617 CDD:275368 3/19 (16%)
C2H2 Zn finger 625..645 CDD:275368 7/19 (37%)
C2H2 Zn finger 653..673 CDD:275368 8/19 (42%)
C2H2 Zn finger 681..701 CDD:275368 6/19 (32%)
C2H2 Zn finger 708..725 CDD:275368 4/7 (57%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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