DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and si:ch73-144d13.5

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:XP_017206607.2 Gene:si:ch73-144d13.5 / 100004091 ZFINID:ZDB-GENE-131120-187 Length:396 Species:Danio rerio


Alignment Length:322 Identity:68/322 - (21%)
Similarity:100/322 - (31%) Gaps:132/322 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1123 QQQGSPQQQNM-----------QQSVQQQSVQQQQSLQQQQQQQHHQHHSNSSASSNASSHGSAE 1176
            :.:|.||.:|.           ..:.:..|:::.|....||..:         ..||..:|    
Zfish    53 EMKGEPQYENQNFIAEGKYFSCSNNEKTLSIKRAQDTGSQQCDK---------TISNKINH---- 104

  Fly  1177 ALCMGSSGGANEDSSS--------------------GNNKFVCRVCMKTFSLQRLLNRHMKCHSD 1221
            ..|:.|..|....:.|                    |...|.|:.|.|:||.:..|.||:|.|::
Zfish   105 ERCVKSRKGKKSYTCSLCGKSFKHTGHFKDHMRIHTGEKPFTCQQCGKSFSRKITLQRHVKIHNE 169

  Fly  1222 IKRYL--------------------------------------------------------CTFC 1230
            .|.|:                                                        |..|
Zfish   170 EKPYMCHQCGKSFIQKGYLKVHMKVHTGEKPYTCPQCGRGFIQKGNYRVHMRIHSEEKQHTCPHC 234

  Fly  1231 GKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQ-------------- 1281
            ||.||....|:.|.|||||.:||.|.||.|||.|:.:...| .::||.:.|              
Zfish   235 GKSFNQAGHLRDHIRTHTGEKPYTCPLCGKSFIQKGNYRVH-MRIHSEEKQNTCPQCGKSFNQTG 298

  Fly  1282 ----YAYKERRAKMYVCEECG-------HTTCEPEVHYLHLKNNHPFSPALL--KFYDKRHF 1330
                :.......|.|.|.:||       |.|....:|    ....|::.|..  .|..|.|:
Zfish   299 HLRDHIRTHTGEKPYTCAQCGKGFNQKSHYTVHMRIH----SEEKPYNCAQCGKSFNQKVHY 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 9/19 (47%)
zf-H2C2_2 1212..1235 CDD:290200 11/78 (14%)
C2H2 Zn finger 1227..1247 CDD:275368 9/19 (47%)
zf-H2C2_2 1239..1264 CDD:290200 15/24 (63%)
C2H2 Zn finger 1255..1276 CDD:275368 8/20 (40%)
si:ch73-144d13.5XP_017206607.2 C2H2 Zn finger 92..111 CDD:275368 6/31 (19%)
C2H2 Zn finger 119..139 CDD:275368 1/19 (5%)
zf-H2C2_2 131..156 CDD:316026 6/24 (25%)
RecG <145..>207 CDD:333223 13/61 (21%)
C2H2 Zn finger 147..167 CDD:275368 9/19 (47%)
C2H2 Zn finger 175..195 CDD:275368 0/19 (0%)
COG5048 <199..350 CDD:227381 36/155 (23%)
C2H2 Zn finger 203..223 CDD:275368 0/19 (0%)
C2H2 Zn finger 231..251 CDD:275368 9/19 (47%)
C2H2 Zn finger 259..279 CDD:275368 8/20 (40%)
C2H2 Zn finger 287..307 CDD:275368 0/19 (0%)
C2H2 Zn finger 315..335 CDD:275368 5/19 (26%)
C2H2 Zn finger 343..363 CDD:275368 4/14 (29%)
zf-H2C2_2 359..380 CDD:316026
C2H2 Zn finger 371..391 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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