DRSC/TRiP Functional Genomics Resources

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Protein Alignment ovo and zbtb18

DIOPT Version :9

Sequence 1:NP_001162673.1 Gene:ovo / 31429 FlyBaseID:FBgn0003028 Length:1351 Species:Drosophila melanogaster
Sequence 2:NP_001076421.1 Gene:zbtb18 / 100003157 ZFINID:ZDB-GENE-050419-73 Length:537 Species:Danio rerio


Alignment Length:390 Identity:84/390 - (21%)
Similarity:123/390 - (31%) Gaps:100/390 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   943 IYAQQQQQQQQQHHQQQQQQQHHHFHHQQQQQPQPQSHHSHHHGHGHDNSNMSLPSPTAAAAAAA 1007
            :.:..:..:.::...|:...........:...|......:..||.....|....||.:..:.:..
Zfish   159 LQSDDEDMENKRDSPQEPGSMWMRLPSDRTTSPTTSPREAETHGPDAGKSPAGSPSSSTGSLSRR 223

  Fly  1008 AAAAAAAAAAAHLQRPMSSSSSSGGTNSSNSSGG----SSNSPLLDANAAAAAAAALLDTKPLIQ 1068
            :||:...:|.......:|..||.||....|.:|.    ||.:|       .:..:||:..| :.:
Zfish   224 SAASRRVSADTDCVLDLSVKSSLGGGPGENIAGNPYFCSSVTP-------DSLQSALVQVK-VEK 280

  Fly  1069 SLGLPPDLQLEFVNGGH-----GIKNPLAVENAH------------------------------- 1097
            ..|...|   |.|:|.:     |:|.|.:....|                               
Zfish   281 DTGSDDD---ELVSGDYEMEHSGVKEPPSTNGTHLSLVAQRRLGLEAHLSALREASLASELERDD 342

  Fly  1098 -GGHHRIRNIDCIDDLSKHGHHSQHQQQQ---------------GSPQQQNMQQSVQQQSVQQQQ 1146
             ||.         ||....|..|...|:.               |:|..|.....:..:......
Zfish   343 KGGD---------DDTDVLGGDSDRVQEAAGVESSLLPYVSSMLGAPHTQIFMCPLCNKVFPSPH 398

  Fly  1147 SLQQQQQQQHHQHHSNSSASSNASSHGSAEALCMGSSGGANEDSSSGNNKFVCRVCMKTFSLQRL 1211
            .|     |.|...|........|...|..                   |...|.:|.||||....
Zfish   399 IL-----QIHLSTHFREQEGVRAKPAGDV-------------------NVPTCSICGKTFSCMYT 439

  Fly  1212 LNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVH 1276
            |.||.:.||..|.|.||.|||.|..:.:|.||...||..:|:.|..||:.|||...|..|.:|.|
Zfish   440 LKRHERTHSGEKPYTCTTCGKSFQYSHNLSRHAVVHTREKPHACKWCERRFTQSGDLYRHIRKFH 504

  Fly  1277  1276
            Zfish   505  504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ovoNP_001162673.1 C2H2 Zn finger 1199..1219 CDD:275368 9/19 (47%)
zf-H2C2_2 1212..1235 CDD:290200 12/22 (55%)
C2H2 Zn finger 1227..1247 CDD:275368 9/19 (47%)
zf-H2C2_2 1239..1264 CDD:290200 10/24 (42%)
C2H2 Zn finger 1255..1276 CDD:275368 9/20 (45%)
zbtb18NP_001076421.1 BTB 14..110 CDD:279045
BTB 25..110 CDD:197585
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..232 9/72 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..355 5/28 (18%)
C2H2 Zn finger 387..407 CDD:275368 3/24 (13%)
COG5048 <388..>496 CDD:227381 38/131 (29%)
C2H2 Zn finger 427..447 CDD:275368 9/19 (47%)
zf-H2C2_2 440..462 CDD:290200 12/21 (57%)
C2H2 Zn finger 455..475 CDD:275368 9/19 (47%)
C2H2 Zn finger 483..501 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 101 1.000 Inparanoid score I4977
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.050

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