DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and PTPN13

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_011530467.1 Gene:PTPN13 / 5783 HGNCID:9646 Length:2507 Species:Homo sapiens


Alignment Length:1636 Identity:347/1636 - (21%)
Similarity:544/1636 - (33%) Gaps:596/1636 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 STHREQLTWTVNITTAPDPPANLSVQLRSSKSAFI------TWRPPGSGRYSGFRIRVLGLTDLP 193
            ::|....||..:...:|.|..   :...:.|..|.      |.:|              |::|: 
Human  1266 ASHLGDQTWQESQHGSPSPSV---ISKATEKETFTDSNQSKTKKP--------------GISDV- 1312

  Fly   194 FERSYSLEGNETLQLSAKELTPGGSYQVQAYSVYQGKESVAYTS-----RNFTTKPNTPGKF--I 251
              ..||..|:..:.    |.|...|...|  :..|...|...||     :.|::.|..||..  :
Human  1313 --TDYSDRGDSDMD----EATYSSSQDHQ--TPKQESSSSVNTSNKMNFKTFSSSPPKPGDIFEV 1369

  Fly   252 VWFRNETTL----LVLWQPPFPAGIYTH------YRVSITPDDAIQSVLYVEREGEPPGPAQAAF 306
            ...:|:.:|    .||:.   ..|:.|.      |..::.|..|.:|...:.:     |....|.
Human  1370 ELAKNDNSLGISVTVLFD---KGGVNTSVRHGGIYVKAVIPQGAAESDGRIHK-----GDRVLAV 1426

  Fly   307 KGL-VPGREYNISVQTVSED--------ETSSVPTTARYLTV---------------PERVLNVT 347
            .|: :.|..:..:|:|:...        |....||:..::.|               ||:|...|
Human  1427 NGVSLEGATHKQAVETLRNTGQVVHLLLEKGQSPTSKEHVPVTPQCTLSDQNAQGQGPEKVKKTT 1491

  Fly   348 FDEAYTTSSSFRVRWEPPRTYSEFDAYQVML---------STSRRIFNVPRAANGDSVYFDYPDI 403
            ..:.|    ||         .:|.:.::|.|         |.||....:|...|...|....   
Human  1492 QVKDY----SF---------VTEENTFEVKLFKNSSGLGFSFSREDNLIPEQINASIVRVKK--- 1540

  Fly   404 LEPGRTYEVVVKTIADNVNSWPAS-------GEVTLRPRPVRSLGGFLDDRSNALHISWEPAETG 461
            |.||:                ||:       |:|.|:.... ||.|                   
Human  1541 LFPGQ----------------PAAESGKIDVGDVILKVNGA-SLKG------------------- 1569

  Fly   462 RQDSYRISYHEQTNASEVPAPF--------PVAAESQITTNLTEYTLDSLLAGRRYLIAVQALSK 518
                  :|..|..:|....||.        |.....:|.|.|              |..:|:.::
Human  1570 ------LSQQEVISALRGTAPEVFLLLCRPPPGVLPEIDTAL--------------LTPLQSPAQ 1614

  Fly   519 GVASNASDITRYTRPAAPLIQELRSIDQGLMLSWRSDVN-------SRQDRYEVHYQRNGTREER 576
            .:.:::.|   .::|:.  :::..|.|:..|    ||.:       ||:|.|             
Human  1615 VLPNSSKD---SSQPSC--VEQSTSSDENEM----SDKSKKQCKSPSRRDSY------------- 1657

  Fly   577 TMATNETSLTIHYLHPGSGYEVKVHAISHGVRSEPHSYFQAVFPKPPQNLTLQTVHTNLVVLHWQ 641
                :::|        |||.:..|.|                    |.|::..|           
Human  1658 ----SDSS--------GSGEDDLVTA--------------------PANISNST----------- 1679

  Fly   642 APEGSDFSEYVVRYRTDASPWQRISGLHENEARIKDMHYGERYLVQVNTVSFGVESPHPLELNVT 706
                                |.  |.||                                     
Human  1680 --------------------WS--SALH------------------------------------- 1685

  Fly   707 MPPQPVSNVVPLVDSRNLTLEWPRPDGHVD-FYTLKWWPTDEEDRVEFKNVTQLEDLSSPSVRIP 770
               |.:||:|....|.:     ..|....| ..|:.::|....::.||::       |:||...|
Human  1686 ---QTLSNMVSQAQSHH-----EAPKSQEDTICTMFYYPQKIPNKPEFED-------SNPSPLPP 1735

  Fly   771 IEDLSPGRQY--RFEVQASSNGIRSGTTHLSTRT-----MPL------------IQSDVFIANAG 816
              |::||:.|  :.|..:||:..:....|:|..|     .||            ::.::.|....
Human  1736 --DMAPGQSYQPQSESASSSSMDKYHIHHISEPTRQENWTPLKNDLENHLEDFELEVELLITLIK 1798

  Fly   817 HEQGQDETITLSYTPTPADSTRFDIY-------------RFSMGDPTIKDKEKLANDTERKLSFS 868
            .|:|     :|.:|.|..:. |...|             |...||..||     .|||:    .:
Human  1799 SEKG-----SLGFTVTKGNQ-RIGCYVHDVIQDPAKSDGRLKPGDRLIK-----VNDTD----VT 1848

  Fly   869 GLTPGKLYNV------TVWTVSGGVASLPVQRLYRL-HPLPISDLKAIQVAAREITLHWTAPAGE 926
            .:|.....|:      ||..|.|.|..||  |:..| |.||            :|||        
Human  1849 NMTHTDAVNLLRAASKTVRLVIGRVLELP--RIPMLPHLLP------------DITL-------- 1891

  Fly   927 YTDFELQYLSADEEAPQLLQNVTKNTEITLQGLRPYHNYTFTVVVRSGSIQGTDFADVSVSTLMR 991
                                  |.|.|.....|...|:..:.||.         .:|::    .|
Human  1892 ----------------------TCNKEELGFSLCGGHDSLYQVVY---------ISDIN----PR 1921

  Fly   992 SSAPISASYQTLTAPPGKVDYFQPSDVQPGEVTFEWSLEPAEQHGPIDYFRITCQNADDAADVSS 1056
            |.|.|..:.|.|..    :.|......|                      .:|.:..:.|.|:|.
Human  1922 SVAAIEGNLQLLDV----IHYVNGVSTQ----------------------GMTLEEVNRALDMSL 1960

  Fly  1057 YEFPVNATQGKIDGLVPGNHYIFRIQAKSALGYGAEREHIQTMPILAPPVPEPSVTPLEVSRTSS 1121
            ....:.||:..:. :||.:........||..|.|:......:.|.|.|.....:|...|::    
Human  1961 PSLVLKATRNDLP-VVPSSKRSAVSAPKSTKGNGSYSVGSCSQPALTPNDSFSTVAGEEIN---- 2020

  Fly  1122 TIEISFRQGYFSNAHGMVRSYTIIIAEDVGKNASGLEMPSWQDVQAYTVWLPYQAIE----PYN- 1181
              |||:.:|..|       :|.|       |.:..|.:|...        .|.|:..    |.| 
Human  2021 --EISYPKGKCS-------TYQI-------KGSPNLTLPKGS--------FPNQSSNYSKCPNNS 2061

  Fly  1182 -PFLTSNGSRKSSLEAEHFTIGTANCDK---------HQAGYCNGPLRAGTTYRIKIRAFTDEDK 1236
             .::..:.....|.|||.........|:         :.|||..||   ||   :|:.....|::
Human  2062 ESYIQEDDIYDDSQEAEVIQSLLDVVDEEAQNLLNENNAAGYSCGP---GT---LKMNGKLSEER 2120

  Fly  1237 FTDT-VYSSPIT---TERSDTVIVAATVSAVLLVAMVLVVVYCQHRC-QLIRRASKLARMQ---- 1292
            ..|| ...||:.   ||       |..::.            |:..| :.::..|.:.:.|    
Human  2121 TEDTDCDGSPLPEYFTE-------ATKMNG------------CEEYCEEKVKSESLIQKPQEKKT 2166

  Fly  1293 -------------------------------DELAALPEGYITPNRPVHVKDFSEHYRIMSADSD 1326
                                           ||||.||...:.|:......:.....|::....|
Human  2167 DDDEITWGNDELPIERTNHEDSDKDHSFLTNDELAVLPVVKVLPSGKYTGANLKSVIRVLRGLLD 2231

  Fly  1327 FRF-SEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINANYMP 1390
            ... |:|.|.|:.:.....|.......||.|||:.||||||.:|.   |:.|:.|  ||||:::.
Human  2232 QGIPSKELENLQELKPLDQCLIGQTKENRRKNRYKNILPYDATRV---PLGDEGG--YINASFIK 2291

  Fly  1391 GHNSPREF--IVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWP--VDRVAMFY 1451
            ......||  |..||||.:|..:||:|.||..|..|.|:|:..|..:.||.:|||  :.:..|..
Human  2292 IPVGKEEFVYIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRYWPNILGKTTMVS 2356

  Fly  1452 GDIKVQLIIDTHYHDWSISEFMVS-------RNCESRIMRHFHFTTWPDFGVPEPPQSLVRFVRA 1509
            ..:::.|:     ....:..|:|.       :..|.|.:.|.:||.|||...|..|..|:.|:..
Human  2357 NRLRLALV-----RMQQLKGFVVRAMTLEDIQTREVRHISHLNFTAWPDHDTPSQPDDLLTFISY 2416

  Fly  1510 FRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQY 1574
            .|.:..:.  |||.|||||:|||||.|.:|.:|..|.:....||..:|..||.:|..|||||.||
Human  2417 MRHIHRSG--PIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQRHGMVQTEDQY 2479

  Fly  1575 VCIHQCLLAVL 1585
            :..:|.:|.||
Human  2480 IFCYQVILYVL 2490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628 45/230 (20%)
fn3 247..328 CDD:394996 19/101 (19%)
FN3 319..>749 CDD:442628 77/484 (16%)
fn3 708..796 CDD:394996 22/90 (24%)
fn3 902..978 CDD:394996 11/75 (15%)
fn3 1013..1092 CDD:394996 13/78 (17%)
PTP_tm 1127..1247 CDD:465889 29/135 (21%)
R3-PTPc 1358..1579 CDD:350396 85/231 (37%)
PTPN13XP_011530467.1 KIND 3..190 CDD:214801
FERM_F1_PTPN13 571..666 CDD:340715
B41 573..781 CDD:214604
PH-like 777..877 CDD:473070
PDZ1_PTPN13-like 1090..1181 CDD:467285
PTN13_u3 1177..1367 CDD:465189 26/126 (21%)
PDZ2-PTPN13_FRMPD2-like 1365..1456 CDD:467254 16/98 (16%)
PDZ3_PTPN13_FRMPD2-like 1504..1593 CDD:467181 24/133 (18%)
PDZ4_PTPN13-like 1789..1873 CDD:467182 22/98 (22%)
PDZ5_PTPN13-like 1884..1970 CDD:467183 28/166 (17%)
PTPc-N13 2257..2490 CDD:350445 91/244 (37%)
Blue background indicates that the domain is not in the aligned region.

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