DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and LOC569071

DIOPT Version :9

Sequence 1:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_009295554.1 Gene:LOC569071 / 569071 -ID:- Length:457 Species:Danio rerio


Alignment Length:499 Identity:170/499 - (34%)
Similarity:236/499 - (47%) Gaps:103/499 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1123 IEISFRQGYFSNAHGMVRSYTIIIAEDVGKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTS- 1186
            :|:...:..|:::||.        .|...:..:||:...|..|.|                 || 
Zfish    44 VEVDVNKKSFNHSHGS--------DEPTQQLVTGLQAAQWYKVTA-----------------TSF 83

  Fly  1187 NGSRKSSLEAEHFTIGTANCDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPITTERS 1251
            :|:|:|.      || :.||....||                                       
Zfish    84 SGARRSE------TI-SINCQTDPAG--------------------------------------- 102

  Fly  1252 DTVIVAATVSAVLLVAMVLVVVYCQHRCQLIRRASKLARMQDELAALP---EGYITPNRPVHVKD 1313
                    |.|.:||..:||::.|......||..|  |:..::.:..|   :..||.|:.:....
Zfish   103 --------VIAGVLVFFLLVIIICAGVFVWIRYGS--AKFHNKRSHPPVESKVSITHNKTIASDK 157

  Fly  1314 FSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDD 1378
            |.||:..||.|....||.|::||..||..|:...|.||.|:.|||.:.:||||.||..| .|:..
Zfish   158 FPEHFHNMSCDDKRNFSVEYKELGSVGVKQSSVTARLPENKDKNRISYVLPYDSSRVHL-TVNKA 221

  Fly  1379 DGSDYINANYMPGH-NSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYW 1442
            ..|||.||||:||: |..|::|..||||.||..:||||.||..|.||||:|.|.|.|..||:|||
Zfish   222 GDSDYFNANYIPGYGNVSRQYIAAQGPLPSTVNDFWRMVWEQKSSAIVMVTNCTEDGMVKCEQYW 286

  Fly  1443 PVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSR--NCESRIMRHFHFTTWPDFGVPEPPQSLVR 1505
            |:|.....||::.|.:..:.....|::.||.|..  ..::||:.|||||.|||.|||...:.|::
Zfish   287 PLDNTPCLYGNLLVAVKSENKSESWTLREFHVKNKMTSDTRIVHHFHFTAWPDHGVPCGTEDLIQ 351

  Fly  1506 FVRAFRDVIGTDMR--PIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVFMV 1568
            |....|..|.:...  |.:||||||||::||.||||.:||.:::...|.:...|..||..|..||
Zfish   352 FRELVRQHIESPFSAGPTVVHCSAGVGQTGTLIALDVLLQQLNREKAVGVAAFVKEMRLSRPLMV 416

  Fly  1569 QTEQQYVCIHQCLLAVLEGKEHLLADSLELHANDGYEVT-KIYL 1611
            :||.|||.:|||:|           |||...:...||.| .||:
Zfish   417 ETESQYVFLHQCIL-----------DSLPPQSEPIYENTDSIYV 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020
fn3 247..328 CDD:278470
fn3 343..417 CDD:278470
fn3 443..525 CDD:278470
FN3 548..611 CDD:238020
FN3 620..706 CDD:238020
fn3 708..796 CDD:278470
fn3 824..886 CDD:278470
fn3 902..978 CDD:278470
fn3 1013..1092 CDD:278470
UP_III_II 1106..>1248 CDD:297589 21/125 (17%)
PTPc 1329..1582 CDD:214550 119/257 (46%)
PTPc 1355..1582 CDD:238006 107/231 (46%)
LOC569071XP_009295554.1 PTPc 173..431 CDD:214550 120/269 (45%)
PTPc 199..431 CDD:238006 108/243 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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