DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ptprjb.2

DIOPT Version :9

Sequence 1:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_021326227.1 Gene:ptprjb.2 / 558077 ZFINID:ZDB-GENE-131120-137 Length:263 Species:Danio rerio


Alignment Length:258 Identity:112/258 - (43%)
Similarity:154/258 - (59%) Gaps:23/258 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1366 DHSRFKL----QPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVM 1426
            |.||.||    .|.|     |||||||:||:||.:|||..||||..|..:||||.||:....|||
Zfish     3 DASRVKLLKCENPFD-----DYINANYVPGYNSRKEFIAAQGPLPVTINKFWRMIWENKVYTIVM 62

  Fly  1427 LTRCFEKGREKCDQYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNCESR---IMRHFHF 1488
            ||:|.|.|:.||::|||.:  ..||.:|.|....:|...||:|.:|.: :|.|:.   .:|.|||
Zfish    63 LTKCNELGKVKCEKYWPSE--TDFYHNISVTTTSETELDDWTIRDFSI-KNVETEETCNVRQFHF 124

  Fly  1489 TTWPDFGVPEPPQSLVRFVRAFRDVIG--TDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYV 1551
            |.|||.||||..:.|:.|....|:.:.  :...|.:|||||||||:|||||:|.::..|.:...|
Zfish   125 TAWPDHGVPETTEVLIEFRHLVREHMNQYSCTSPTVVHCSAGVGRTGTFIAIDHLISQIERDSMV 189

  Fly  1552 DIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGK---EHLL---ADSLELHANDGYEVTK 1608
            ||:|||..||..|..|||||.|||.::||...:::.:   .:|:   ..|.|::.|..::..|
Zfish   190 DIYGIVHDMRMHRALMVQTEDQYVYLYQCAYDLIQSRTMSNNLIYQNTASFEIYQNVDFKENK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020
fn3 247..328 CDD:278470
fn3 343..417 CDD:278470
fn3 443..525 CDD:278470
FN3 548..611 CDD:238020
FN3 620..706 CDD:238020
fn3 708..796 CDD:278470
fn3 824..886 CDD:278470
fn3 902..978 CDD:278470
fn3 1013..1092 CDD:278470
UP_III_II 1106..>1248 CDD:297589
PTPc 1329..1582 CDD:214550 107/224 (48%)
PTPc 1355..1582 CDD:238006 107/224 (48%)
ptprjb.2XP_021326227.1 PTPc 3..221 CDD:238006 107/225 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 1 1.000 - - FOG0001181
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106915
Panther 1 1.100 - - O PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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