DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ptprz1b

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_073803012.1 Gene:ptprz1b / 553019 ZFINID:ZDB-GENE-050506-100 Length:1457 Species:Danio rerio


Alignment Length:1338 Identity:306/1338 - (22%)
Similarity:500/1338 - (37%) Gaps:404/1338 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   421 VNSWPASGEVTLRPRPVRSLGGFLDDR---SNALHISWEPAET--------------GRQDSY-- 466
            |..:|..|..  |..|:.....|...|   .|....:||...|              |....|  
Zfish    52 VKKYPVCGNA--RQSPIDISEEFTQVRLQYQNLQLENWEQPTTDSTTITNDGKTVVIGLNSEYFI 114

  Fly   467 ------------RISYH-EQTNASEVPAP-------FPVAAESQITTNLTEYTLDSLLAGRRYLI 511
                        ||::| .:.||:...:.       ||:..:.....:|...::|..::....:.
Zfish   115 SGGGLRSRFKVGRITFHWGRCNATSDGSEHSLNGNRFPLEMQIYCFDDLEFESIDEAMSSGGKIA 179

  Fly   512 AVQALSK----------GVASNASDITRYTRPAAPLIQELRSIDQGLMLSWRSDVNSRQDRYEVH 566
            ||..|.:          .:....::::|:.:.:|  ::|...:  .|:          .:..|.:
Zfish   180 AVAVLFQASIEDNQDYAAIIEGVNNVSRFGKSSA--VEEFSLL--ALL----------PENTEKY 230

  Fly   567 YQRNGTRE-------------ERTMATNETSLTIH---YLHPGSGYEVKVHAISHGVRSEPHSYF 615
            :..||:..             :.|:..:||.|.:.   .....:||.:....:.:..|.:...:.
Zfish   231 FMYNGSLTAPPCSENVEWIVFKNTVGISETQLEVFCEVMTMQQAGYAMLTDYLQNNYREQQQQFM 295

  Fly   616 QAVF---------PKP-----PQNLTLQTVHTNLVVLHWQAPEGSDFSEYVVRYRTDASPWQRIS 666
            ..||         |.|     |||:...:.:...:|:.|:.|. :.:...:.||   :..:||:.
Zfish   296 GQVFSSYTGTEEVPAPMCSSEPQNVQADSQNFTGIVVTWERPR-AVYDTVIERY---SVTYQRLQ 356

  Fly   667 GLHENE------------ARIKDMHYGERYLVQVNTVSF-GVESPHPLELNVTMP-PQPVSNVVP 717
            |.:..:            |.|.::.....|:|||..:.. |:......::.|.|| ..||:    
Zfish   357 GQNPPKQQYLTDGDQDVGAIIHNLLANSSYVVQVVALCMNGLTGKMSDQVIVDMPFEDPVN---- 417

  Fly   718 LVDSRNLTLEWPRPDGHVDFYTLKWWPTDEEDRVEFKNVTQLEDLSSPSVRIPIEDLSPGRQYRF 782
                        .||.:.|.       .:.|:..|       |..|:||.:.|     ||   ||
Zfish   418 ------------EPDPYGDL-------AESEEYNE-------EHTSAPSSKPP-----PG---RF 448

  Fly   783 EVQASSNGIR--------------SGTTHLSTRTMPLIQSDVFIANAGHEQGQDETITLSYTPTP 833
            .::.|.:.|.              |.||.::.|.....:|.:......::..::||...:....|
Zfish   449 LIRDSGSSISITTSTDQPGFLFPVSRTTPITVRRKITEESSLSQPPVQNKSRKNETKRPANRLLP 513

  Fly   834 ADSTRF--------DIYRFSMGD-------PTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTV 883
            .||..|        |:|...:.:       |||.:...:..:||:    :..:|.|         
Zfish   514 DDSGHFPQSNTVVTDVYYEDVLNSSTTNITPTINNNLLIDQNTEK----ASTSPPK--------- 565

  Fly   884 SGGVASLPVQRLYRLHPLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADEEAPQLLQNV 948
                                      |.|....|.:.|..:.         |||           
Zfish   566 --------------------------QPANESSTANATTGSS---------LSA----------- 584

  Fly   949 TKNTEITLQGLRPYHNYTFTVVVRSGSIQGTDFADVSVSTLMRSSAPISASYQTLTAPPGKV--- 1010
              :.:|..|..:|..|..|        :..|.|.:..|  ||.|.|  ::.|::.|..|..:   
Zfish   585 --SMKIISQTTQPLFNDVF--------VTATSFNNERV--LMVSDA--TSLYESSTRSPTIILEE 635

  Fly  1011 --DYFQPSDVQPGEVTFEWS---LEPAEQHGPIDYFRITCQNADDAADVSSYEFPVNATQGKIDG 1070
              .:|.|||.| ||.:...|   ||..::...::..|:..:|||          |....:...:|
Zfish   636 GSAHFPPSDGQ-GEFSGSGSAIFLEELDREWELEQTRMAPKNAD----------PRKTQEENHEG 689

  Fly  1071 LVPGNHYIFRIQAKSALGYGAEREHIQTMPILAPPVPEPSVTPLEVSRTSSTIEISFRQGYFSNA 1135
            |            .|...:.:|||                        .|||        |....
Zfish   690 L------------PSTFFFESERE------------------------ASST--------YKPQN 710

  Fly  1136 HGMVRSYTIIIAEDVGKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLEAEHFT 1200
            ...:...|.....|.|....|..:...:|:       |.|.|.|           |.:::.|:..
Zfish   711 QDFLSWVTWSAESDSGSGQGGSMISQTEDI-------PIQLIIP-----------KLNIQEENHA 757

  Fly  1201 IGTANCDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPITTERSDTVIVAATVSAVLL 1265
            ..:.:..:.:.|...|                     |:|...:.:      .:.:.:|::.:.|
Zfish   758 EASNSSPESRVGMVGG---------------------TETEKRAVV------PLAIVSTLTVLCL 795

  Fly  1266 VAMVLVVVYCQHRCQLIRRASKLARMQDE-------LAALPEGYITP---NRPVHVKDFSEHYRI 1320
            |.:|.:::|.       ||..:.|....|       ::|.....:.|   |..:.||||.:|  :
Zfish   796 VVLVGILIYW-------RRCFQTAHFYVEDTNSARAISAPSTPLLLPTEDNEALPVKDFVKH--V 851

  Fly  1321 MSADSDFRFSEEFEELKHVGRD-QACS--------FANLPCNRPKNRFTNILPYDHSRFKLQPVD 1376
            ....::.:||:|||.||....: |.|:        .:|.|.|:.|||:.|||.|||||.||....
Zfish   852 ADLHANHKFSKEFEILKESYEEIQGCTADMGITTDSSNHPDNKSKNRYINILAYDHSRVKLSQNS 916

  Fly  1377 DDDG--SDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCD 1439
            |.||  .|||||||:.|.|.|:.:|..||||..:.|:||||.||.|...|||:|...||||.|||
Zfish   917 DKDGKTGDYINANYVDGFNQPKAYIAAQGPLKGSLEDFWRMIWEQNVGVIVMITNLVEKGRRKCD 981

  Fly  1440 QYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSRN-----------CESRIMRHFHFTTWPD 1493
            ||||::. ...||...|.|........:::..|.: ||           .:.|.:.|||:|.|||
Zfish   982 QYWPLEN-QEDYGCFLVTLKSSRTLAYYTLRTFTL-RNVQIKKGSQKGRSQERTVLHFHYTQWPD 1044

  Fly  1494 FGVPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVF 1558
            .||||....|:.|:|........:|.|::|||||||||:||:|.:|.:|:.|.:.:.|:|.|.:.
Zfish  1045 MGVPEYTLPLLSFIRTSSQARTAEMGPVVVHCSAGVGRTGTYIVIDSMLKQIKEENTVNIMGFLK 1109

  Fly  1559 AMRKERVFMVQTEQQYVCIHQCLLAVLEGKEHLLADSL 1596
            .:|.:|.::||||:|||.||..|:..:..||.|::.||
Zfish  1110 HIRTQRNYLVQTEEQYVFIHDALVEAIRSKETLVSSSL 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628 69/420 (16%)
fn3 708..796 CDD:394996 20/102 (20%)
fn3 902..978 CDD:394996 12/75 (16%)
fn3 1013..1092 CDD:394996 18/81 (22%)
PTP_tm 1127..1247 CDD:465889 16/119 (13%)
R3-PTPc 1358..1579 CDD:350396 104/233 (45%)
ptprz1bXP_073803012.1 None
Blue background indicates that the domain is not in the aligned region.

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