DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ptpn11

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_012818337.1 Gene:ptpn11 / 549586 XenbaseID:XB-GENE-22063677 Length:596 Species:Xenopus tropicalis


Alignment Length:650 Identity:164/650 - (25%)
Similarity:253/650 - (38%) Gaps:190/650 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1014 QPSDVQPGEVTFEWSLEPAEQHGPIDYFRITCQNADDAADVSSYEFPVNATQGKIDGLVPGNHYI 1078
            :||...||:.|..     ..::|.:.:.:|  ||..|..|:                        
 Frog    32 RPSKSNPGDFTLS-----VRRNGAVTHIKI--QNTGDYYDL------------------------ 65

  Fly  1079 FRIQAKSALGYGAEREHIQTMPILAPPVPEPSVTPLEVSRTSSTIEISFRQGYFSNAHGMVRSYT 1143
                      ||.|:     ...||..|.                       |:...||.::.  
 Frog    66 ----------YGGEK-----FATLAELVQ-----------------------YYMEHHGQLKE-- 90

  Fly  1144 IIIAEDVGKNASGLEMPSWQDVQAYTVWLPYQAIEP-----YNPFLTSNGSRKSSLE-AEHFTIG 1202
                    ||...:|:.           .|....:|     ::..|:...:.|...| .:|.:..
 Frog    91 --------KNGDVIELK-----------YPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFL 136

  Fly  1203 TANCDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPITTERSDTVIVAATVSAVLLVA 1267
            ......|...:.           :.:|  |.:||.......|.:|.                   
 Frog   137 VRESQSHPGDFV-----------LSVR--TGDDKAESNDGKSKVTH------------------- 169

  Fly  1268 MVLVVVYCQHRCQLIRRASKLARMQDELAALPEGY------ITPNRPVHVKDFSEHYRIMSADSD 1326
               |::.||.....:....|.    |.|..|.|.|      .|....:.:|......||.:|:.:
 Frog   170 ---VMIRCQDLKYDVGGGEKF----DSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIE 227

  Fly  1327 FR-----------------FSEEFEELKHVGRDQACSF------ANLPCNRPKNRFTNILPYDHS 1368
            .|                 |.||||.|    :.|.|..      .....|:.|||:.||||:||:
 Frog   228 SRVKELSKPAETADKFKQGFWEEFETL----QQQECKLLYSRKEGQRQENKNKNRYKNILPFDHT 288

  Fly  1369 RFKLQPVD-DDDGSDYINAN-YMPGH----NSP---REFIVTQGPLHSTREEFWRMCWESNSRAI 1424
            |.:|...| ::..||||||| .||..    |:|   :.:|.|||.|.:|..:||||.::.|||.|
 Frog   289 RVELHDGDPNEQVSDYINANIIMPEFETKCNNPKPKKRYIATQGCLQNTVNDFWRMVFQENSRVI 353

  Fly  1425 VMLTRCFEKGREKCDQYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSR----NCESRIMRH 1485
            ||.|:..|:|:.||.:|||.:.....||.::|:.:.:|..||:.:.|..:|:    |.| |.:..
 Frog   354 VMTTKEVERGKSKCVKYWPDEFALKEYGVMRVRNVKETPAHDYILRELKLSKVGQGNTE-RTVWQ 417

  Fly  1486 FHFTTWPDFGVPEPPQSLVRF---VRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHK 1547
            :||.||||.|||..|..::.|   |...:|.| .|..|::||||||:||:||||.:|.::..|.:
 Frog   418 YHFKTWPDHGVPTDPGGVLDFLEEVHHKQDGI-ADAGPVVVHCSAGIGRTGTFIVIDILIDVIRE 481

  Fly  1548 SDY---VDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGKEHLLADSLELHANDGYEVTKI 1609
            ...   :|:...:..:|.:|..|||||.||..|:..:...:|..:..:.:. :.....|:|.|.|
 Frog   482 KGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEE-QKSKRKGHEYTNI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996 13/77 (17%)
PTP_tm 1127..1247 CDD:465889 18/125 (14%)
R3-PTPc 1358..1579 CDD:350396 97/239 (41%)
ptpn11XP_012818337.1 SH2_N-SH2_SHP_like 5..103 CDD:198203 24/160 (15%)
SH2_C-SH2_SHP_like 111..218 CDD:198185 22/145 (15%)
PTPc-N11 272..524 CDD:350453 100/253 (40%)
Blue background indicates that the domain is not in the aligned region.

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