DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ptpn11b

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_956748.1 Gene:ptpn11b / 393426 ZFINID:ZDB-GENE-040426-1158 Length:592 Species:Danio rerio


Alignment Length:656 Identity:160/656 - (24%)
Similarity:260/656 - (39%) Gaps:156/656 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1128 RQGYFSNAHGMVRSYTIIIAEDVGKNASGLEMPSWQDVQAYTV------WLPYQAIEPYNPFLTS 1186
            |:.:..|..|:...:.::..   |.:.|.|..||..:...:|:      .:.:..|:....:...
Zfish     4 RRWFHPNITGIEAEHLLLTR---GVHGSFLARPSKSNPGDFTLSVRRNDEVTHIKIQNSGDYYDL 65

  Fly  1187 NGSRKSSLEAE--------HFTIGTANCDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYS 1243
            .|..|.:..||        |..:...|.|..:..|   ||..             :|..::..|.
Zfish    66 YGGEKFATLAELVQYYTEQHDLLRERNGDVIELKY---PLNC-------------KDPTSERWYH 114

  Fly  1244 SPITTERSDTVIVAATVSAVLLVA--------MVLVVVYCQHRCQLIRRASKLARMQ-------- 1292
            ..::...::.::.....|...||.        .||.|:..:.:.:.:.|.:|:..:.        
Zfish   115 GHLSGRDAEKLLTEKGKSGSFLVRESQSKPGDFVLSVLTNEEKHENVDRKTKVTHVMIRYQDGKY 179

  Fly  1293 --------DELAALPEGYITPNRP--------VHVKDFSEHYRIMSADSDFR------------- 1328
                    |.||.|.|.|  ...|        ||:|......||.:|:.:.|             
Zfish   180 DVGGGERFDTLADLVEHY--KKNPMVEESGIVVHLKQPFNATRINAANIENRVHELNKVADNSEK 242

  Fly  1329 ----FSEEFEELKHVGRDQACSF------ANLPCNRPKNRFTNILPYDHSRFKLQPVDDD-DGSD 1382
                |.||||.|    :.|.|..      ...|.|:.|||:.||||:|.:|.:::..|.| .|||
Zfish   243 PKQGFWEEFEVL----QQQECKLLYPRKEGQRPENKNKNRYKNILPFDTTRVQIKEADPDVPGSD 303

  Fly  1383 YINANYMPGHNSP-------REFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQ 1440
            ||||||:...|..       :.||.|||.|.:|..:||:|.::.|:..|||.|:..|:||.||.:
Zfish   304 YINANYIRSVNEEGRHMDEGKVFIATQGCLQNTVLDFWKMVYQENTHVIVMTTKEMERGRNKCVR 368

  Fly  1441 YWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVS---RNCESRIMRHFHFTTWPDFGVPEPPQS 1502
            |||.......:|.:.|:.|.:....|:...|..|:   |....|.:.|:.:.:|||.|||..|..
Zfish   369 YWPDLNSTKEFGKVCVKNIEEHTAQDYIRRELEVTRLDRREPPRCIWHYQYLSWPDHGVPNEPGG 433

  Fly  1503 LVRF---VRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDY---VDIFGIVFAMR 1561
            ::.|   |...:..| .:..||:||||||:||:||.|.:|.::..|::...   :||...:..:|
Zfish   434 VLSFLEQVNRTQSAI-PESGPIVVHCSAGIGRTGTIIVIDILIDIINRQGLDCDIDIPKTIQRVR 497

  Fly  1562 KERVFMVQTEQQYVCIHQCLLAVLEGKEHLLADSLELHANDGYEVTKIYLERQPQTKMGTLPIRA 1626
            ::|..|||||.||..|                          |...:.|::              
Zfish   498 QQRSGMVQTEAQYKFI--------------------------YMAVQQYID-------------- 522

  Fly  1627 SLAMAEKLDADLMTNKDEDEDQEQQQQQQLQLATEVKPKGSNDDEEDEEDDDDDDDDQQPLNNET 1691
               .|:|...:...||.::.:....:..|:..| ..||..|:.......:||....:...:.|..
Zfish   523 ---TAQKRLEEEQRNKTKEREYSNIKYPQMSNA-RAKPNMSSSRSSSVMNDDSSVYENLNIKNPK 583

  Fly  1692 TATLSS 1697
            .:|.|:
Zfish   584 GSTSSN 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889 22/132 (17%)
R3-PTPc 1358..1579 CDD:350396 88/237 (37%)
ptpn11bNP_956748.1 SH2_N-SH2_SHP_like 5..103 CDD:198203 18/103 (17%)
SH2_C-SH2_SHP_like 111..218 CDD:198185 19/108 (18%)
PTPc-N11_6 273..523 CDD:350392 93/293 (32%)
Blue background indicates that the domain is not in the aligned region.

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