DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and PTPRQ

DIOPT Version :9

Sequence 1:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_016874762.1 Gene:PTPRQ / 374462 HGNCID:9679 Length:2536 Species:Homo sapiens


Alignment Length:1783 Identity:443/1783 - (24%)
Similarity:706/1783 - (39%) Gaps:471/1783 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 RIDYSPPFGFPEPNTTIPASDI--------------GKDIKFSRALPGTEYNFWL-YYTNSTHRE 139
            |:.:|||   .:||..|.|.::              ..||......|.|.||..: .||...|..
Human   905 RLKWSPP---EKPNGIIIAYEVLYKNIDTLYMKNTSTTDIILRNLRPHTLYNISVRSYTRFGHGN 966

  Fly   140 QLTWTVNITTA---PD-PPANLSVQLRSSKSAFITWRPPGS--GRYSGFRIRVLGLTDLPFERSY 198
            |::..:::.|:   || .|.|::.:..||....:::.||.|  |....:.|.:        :|| 
Human   967 QVSSLLSVRTSETVPDSAPENITYKNISSGEIELSFLPPSSPNGIIQKYTIYL--------KRS- 1022

  Fly   199 SLEGNETLQLSAKELTPGGSYQVQAYSVY-----------QGKESVAYTSRNFTTKPNTPGK-FI 251
              .|||...::...||..... ::.|:.|           :|..|...:.......|::|.: |.
Human  1023 --NGNEERTINTTSLTQNIKV-LKKYTQYIIEVSASTLKGEGVRSAPISILTEEDAPDSPPQDFS 1084

  Fly   252 VWFRNETTLLVLWQPPF-PAGIYTHYRVSITPDDAIQSVLYVER--------------------- 294
            |...:..|:.:.||||. |.||..:|.|.:....:::::...|.                     
Human  1085 VKQLSGVTVKLSWQPPLEPNGIILYYTVYVWNRSSLKTINVTETSLELSDLDYNVEYSAYVTAST 1149

  Fly   295 -----------------EGEPPGPAQAAF-------------------KGLVPGREY-------- 315
                             ||.|..|.:..:                   .|::   :|        
Human  1150 RFGDGKTRSNIISFQTPEGAPSDPPKDVYYANLSSSSIILFWTPPSKPNGII---QYYSVYYRNT 1211

  Fly   316 ------NISVQTVSED-ETSSVPTTARYLT--------------------------------VPE 341
                  |.::..|:.| :..:|.|....||                                :||
Human  1212 SGTFMQNFTLHEVTNDFDNMTVSTIIDKLTIFSYYTFWLTASTSVGNGNKSSDIIEVYTDQDIPE 1276

  Fly   342 R-VLNVTFDEAYTTSSSFRVRWEPPRTYSEFDAYQVML---STSRRIFNVPRAANGDSVYFD--- 399
            . |.|:|::.  .:|::..|.|.||...:....|.|.|   .|.|.: ..|......|:|||   
Human  1277 GFVGNLTYES--ISSTAINVSWVPPAQPNGLVFYYVSLILQQTPRHV-RPPLVTYERSIYFDNLE 1338

  Fly   400 -YPDIL-------EPG----RTYEVVVKTIADNVNSWPASGEVTLRPRPVRSLGGFLDDRSNALH 452
             |.|.:       |.|    .|.::.:||..|...:.|.             :..|.:..|.::.
Human  1339 KYTDYILKITPSTEKGFSDTYTAQLYIKTEEDVPETSPI-------------INTFKNLSSTSVL 1390

  Fly   453 ISWEPAETGRQDSYRISYHEQTNASEVPAPFPVAAESQITTNLTEYTLDSLLAGRRYLIAVQALS 517
            :||:|..  :.:...|||............|..:....|...|:.:||.|..|..|       ..
Human  1391 LSWDPPV--KPNGAIISYDLTLQGPNENYSFITSDNYIILEELSPFTLYSFFAAAR-------TR 1446

  Fly   518 KGVASNASDITRYTRPAAPLI--QELRSID---QGLMLSWRSD--------VNSRQDRYEVHYQR 569
            ||:.. :|.:..||..:.||.  |.|..|:   ..:.|.|...        |.|    :::|...
Human  1447 KGLGP-SSILFFYTDESVPLAPPQNLTLINCTSDFVWLKWSPSPLPGGIVKVYS----FKIHEHE 1506

  Fly   570 NGTREERTMATNETSLTIHYLHPGSGYEVKVHA---ISHGVRSEPHSYF--QAVFPKPPQNLTLQ 629
            ..|...:.::..:|...:..|.|.|.|.::|.|   :.:|.:......|  |...|...||:...
Human  1507 TDTIYYKNISGFKTEAKLVGLEPVSTYSIRVSAFTKVGNGNQFSNVVKFTTQESVPDVVQNMQCM 1571

  Fly   630 TVHTNLVVLHWQAPEGSD--FSEYVV---RYRTDASPWQRISGLHENEARIKDMHY-------GE 682
            ......|::.|..|:.::  .::|:|   |..|..||              :|..|       ..
Human  1572 ATSWQSVLVKWDPPKKANGIITQYMVTVERNSTKVSP--------------QDHMYTFIKLLANT 1622

  Fly   683 RYLVQV---NTVSFGVESP-HPLELNVTMPPQPVSNVVPLVDSRNLTLEWPRPD---GHVDFYTL 740
            .|:.:|   .:...|.||. |...|..|:|..|.:.....|.|.:.||.|.|||   |:...|.:
Human  1623 SYVFKVRASTSAGEGDESTCHVSTLPETVPSVPTNIAFSDVQSTSATLTWIRPDTILGYFQNYKI 1687

  Fly   741 ---------KWWPTDEEDRVEFKNVTQLED--LSSPSVRIPIEDLSPGRQYRFEVQASSN-GIRS 793
                     |.|  :.|:.||::.:..|.:  |:..:|    ..|...|.|||:|.||:| |..:
Human  1688 TTQLRAQKCKEW--ESEECVEYQKIQYLYEAHLTEETV----YGLKKFRWYRFQVAASTNAGYGN 1746

  Fly   794 GTTHLSTRTMPLIQSDVFIANAGHEQGQDETITLSYTPTPADSTRFDIYRFSMGDPTIKDKEKLA 858
            .:..:||:|:|           |...|..|.:.:..| :|          ||             
Human  1747 ASNWISTKTLP-----------GPPDGPPENVHVVAT-SP----------FS------------- 1776

  Fly   859 NDTERKLSFSGLTPGKLYNVTVWTVSGGVASLPVQRLYRLHPLPISDLKAIQVAAREITLHWTAP 923
                  :|.|...|..:...|.:.:                     |:|::              
Human  1777 ------ISISWSEPAVITGPTCYLI---------------------DVKSV-------------- 1800

  Fly   924 AGEYTDFELQYLSADEEAPQLLQNVTKNTEITLQGLRPYHNYTFTVVVRSGSI-----QGTDFAD 983
              :..:|.:.::.::||          |..|.::.|..:..|:..:...:|:|     :|...|:
Human  1801 --DNDEFNISFIKSNEE----------NKTIEIKDLEIFTRYSVVITAFTGNISAAYVEGKSSAE 1853

  Fly   984 VSVSTLMRSSAPISASYQTLTAPPGKVDYFQ-PSDVQPGEVTFEWSLEPAEQHGPIDYFRITCQN 1047
            :.|:||  .|||        ..||..:.:.: |.:|...::||   |.|::.:|.|..::.....
Human  1854 MIVTTL--ESAP--------KDPPNNMTFQKIPDEVTKFQLTF---LPPSQPNGNIQVYQALVYR 1905

  Fly  1048 ADDAADVSSYEFPV-----NATQGKIDGLVPGNHYIFRIQAKSALGYGAEREHIQTMPILAPPVP 1107
            .||...|..:...:     ......::||..|:.|...:.|.::.|.|.:.....||.|.||..|
Human  1906 EDDPTAVQIHNLSIIQKTNTFVIAMLEGLKGGHTYNISVYAVNSAGAGPKVPMRITMDIKAPARP 1970

  Fly  1108 EPSVTPL-----EVSRTSSTIEISFRQGYFSNAHGMVRSYTIIIAEDVGKNASGLEMPSWQDVQA 1167
            :...||:     ::..||:||.|.....|:|:.||.:::..:::.| .|....| .:..|.|  |
Human  1971 KTKPTPIYDATGKLLVTSTTITIRMPICYYSDDHGPIKNVQVLVTE-TGAQHDG-NVTKWYD--A 2031

  Fly  1168 YTVWLPYQAIEPY-------NPFLTSNGSRKSSLEAEHFTIGTANC-------DKHQAGYCNGPL 1218
            |     :....||       ||..| .|..|.|...|.:.||..|.       ||    .|||||
Human  2032 Y-----FNKARPYFTNEGFPNPPCT-EGKTKFSGNEEIYIIGADNACMIPGNEDK----ICNGPL 2086

  Fly  1219 RAGTTYRIKIRAFTDEDKFTDTVYSSPITT------ERSDTVIVAAT---VSAVLLVAMVLVV-- 1272
            :....|..|.||.....:|||:.||.|:.|      ||:..:|::.|   :|.:||...:...  
Human  2087 KPKKQYLFKFRATNIMGQFTDSDYSDPVKTLGEGLSERTVEIILSVTLCILSIILLGTAIFAFAR 2151

  Fly  1273 ---------VYCQHRCQLIRRASKLARMQDELAALPE---------------------------G 1301
                     .|.....::|....||    |:|..:.:                           .
Human  2152 IRQKQKEGGTYSPQDAEIIDTKLKL----DQLITVADLELKDERLTRYSSFFFRRKEIFVIQLLS 2212

  Fly  1302 YITPNRPVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYD 1366
            |....:|:..|.|.:|...:..:::.:|.|||.||....:|.:.:.|:||.||.||||.||.||:
Human  2213 YRKSIKPISKKSFLQHVEELCTNNNLKFQEEFSELPKFLQDLSSTDADLPWNRAKNRFPNIKPYN 2277

  Fly  1367 HSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCF 1431
            ::|.||.......|||||||:|:.|:..|.|||.|||||..|..:||||.||:.::.:||||:||
Human  2278 NNRVKLIADASVPGSDYINASYISGYLCPNEFIATQGPLPGTVGDFWRMVWETRAKTLVMLTQCF 2342

  Fly  1432 EKGREKCDQYWPVD-RVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNCESRIMRHFHFTTWPDFG 1495
            ||||.:|.||||.| :....:|||.:..:::....||:|.:..:.|:.:...:|..:||.||:.|
Human  2343 EKGRIRCHQYWPEDNKPVTVFGDIVITKLMEDVQIDWTIRDLKIERHGDCMTVRQCNFTAWPEHG 2407

  Fly  1496 VPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAM 1560
            |||....|:.||:..|.....|..|:||||||||||:|.|||||.:.|||:..|:|||:|:|..:
Human  2408 VPENSAPLIHFVKLVRASRAHDTTPMIVHCSAGVGRTGVFIALDHLTQHINDHDFVDIYGLVAEL 2472

  Fly  1561 RKERVFMVQTEQQYVCIHQCLLAVLEGK 1588
            |.||:.|||...||:.:|||:|.:|..|
Human  2473 RSERMCMVQNLAQYIFLHQCILDLLSNK 2500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020 22/104 (21%)
fn3 247..328 CDD:278470 23/154 (15%)
fn3 343..417 CDD:278470 24/91 (26%)
fn3 443..525 CDD:278470 18/81 (22%)
FN3 548..611 CDD:238020 14/73 (19%)
FN3 620..706 CDD:238020 21/101 (21%)
fn3 708..796 CDD:278470 30/102 (29%)
fn3 824..886 CDD:278470 8/61 (13%)
fn3 902..978 CDD:278470 11/80 (14%)
fn3 1013..1092 CDD:278470 18/84 (21%)
UP_III_II 1106..>1248 CDD:297589 48/160 (30%)
PTPc 1329..1582 CDD:214550 122/253 (48%)
PTPc 1355..1582 CDD:238006 110/227 (48%)
PTPRQXP_016874762.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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