DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and Pez

DIOPT Version :9

Sequence 1:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_001260127.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster


Alignment Length:1476 Identity:275/1476 - (18%)
Similarity:475/1476 - (32%) Gaps:497/1476 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 YSVYQG-KESVAYTSRNFTTKPNTPGKFIVWFRNETTLL------VLWQPPFPAGIYTHYRVSIT 281
            |..||| |:|..|..::.....|..|     ..|:.::|      ||.|   .||| .|...|..
  Fly   156 YDSYQGDKQSKDYLKKSLVLPRNMQG-----LANDDSMLEGLIVEVLQQ---QAGI-AHLSQSQA 211

  Fly   282 PDDAIQSVLYVEREGEPPGPAQ----------AAFKGLV----PGREYNISVQTVSEDETSSVPT 332
            .:..||....:|..||....|:          .|..|:|    .||:|      ....|..:|..
  Fly   212 EEMYIQCCQQLEGYGEERFAAKDTLGNDLLLGLAINGMVVNADNGRQY------FPWKEFHTVTI 270

  Fly   333 TARYLTVPERVL--------NVTFDEAYTTSSSFRVRWEPPRTYSEFDAYQVMLSTSRRIFNVPR 389
            ..|.:.:.:..|        :..|.||.|.    |..|:  .|.|:...::..:.|:.       
  Fly   271 DKRTIKIEQNKLDGGGSIVGSFIFSEADTA----RYFWK--LTISQHKFFKRYIDTAT------- 322

  Fly   390 AANGDSVYFDYPDILEPGRTYEVVVKTIADNVNSWPASGEVTLRPRPVRSLGGFLDDRSNALHIS 454
                       |..|..|...|               ||     |..|.|:|          ::.
  Fly   323 -----------PSSLGSGADAE---------------SG-----PLGVDSVG----------YVD 346

  Fly   455 WEPAETGRQDSYRISYHEQTNASEVPAPFPVAAESQITTNLTEYTLDSLLAGRRYLIAVQALSKG 519
            ::..|....:..:..:.:|.:..:..   .:..:..|::|::..|..:.:.|:            
  Fly   347 YDYNEAAAAEQLQQHHQQQQHMQQQQ---QIQQQQMISSNISLATSANQMLGQ------------ 396

  Fly   520 VASNASDITRYTRPAAPLIQELRSIDQGLMLSWRSDVNSRQDRYEVHYQRNGTREERTMAT---- 580
             :|:..|::.         ..|.| ..|::....|:.|:..|..|        |.:..:.|    
  Fly   397 -SSSCLDLSN---------NNLHS-SSGMLHHGGSNNNNNNDERE--------RLKAMLPTYRPA 442

  Fly   581 --NETSLTIHYLHPGSGYEVKVHAISHGVRSEPHSYFQAVFPKPPQNLTLQTVHT------NLVV 637
              .||::.:.|..|.:.:    |.::..:.:..::|:....|         .||.      ||:.
  Fly   443 PDYETAVQLKYRTPSAEF----HNVALAMAAPGNAYYAGSQP---------DVHNPGMHNENLLY 494

  Fly   638 LHWQAPEGSDFSEYVVRYRTDASPWQRISGLHENEARIKDMHYGERYLVQVNTVSFGVESPHP-- 700
            .|..|.          ||...|.|   .:.||         |:...|..|....|    .|.|  
  Fly   495 GHMTAH----------RYPDVAQP---AAALH---------HHINLYQAQHQPQS----HPQPMS 533

  Fly   701 -----LELNVTM------PPQPVSNVVPLVDSRNLTLEWPRPDGHVDFYTLKWWPTDEEDRVEFK 754
                 |||:..|      .|.|..|.:....:.:|.:..|||                       
  Fly   534 PAQAYLELSQRMHMMRHKAPPPYVNRLSSSSTPDLAVATPRP----------------------- 575

  Fly   755 NVTQLEDLSSPSVRIPIEDLSPGRQYRFEVQASSNGIRSGTTHLSTRTMPLIQSDVFIA-NAGHE 818
                               |...|.|   |..||..:      :|.||  |.....::| .||..
  Fly   576 -------------------LQGFRNY---VSGSSPDL------VSNRT--LFNGGQYVALPAGGH 610

  Fly   819 QGQDETITLSYTPTPADSTRFDIYRFSMGDPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTV 883
            .|.        .||.:.:|....|::                    :|..|              
  Fly   611 AGN--------IPTSSGATMLHQYQY--------------------VSHMG-------------- 633

  Fly   884 SGGVASLPVQRLYRLHPLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADEEAPQLLQNV 948
                           |..|                 :..|.|.:     :.|:..||.|.::..:
  Fly   634 ---------------HSQP-----------------YLPPHGTF-----ENLNMIEEQPSIMSQL 661

  Fly   949 TKNTEITLQGLRPYHNYTFTVVVRSGSIQGTDFADVSVSTL----MRSSAP-----------ISA 998
            .::.            .:......:||:     ...|..||    .|||.|           :::
  Fly   662 RQSA------------MSQAAAAAAGSV-----VTQSSPTLPPSGYRSSVPPPASSPLPPPVVAS 709

  Fly   999 SYQTLTAPPGKVDYFQPSDVQPGEVTFEWSLEPAEQHGPIDYFRITCQNADDAADVSSYEFPVNA 1063
            |:::.|          |:.:|...|  ..|:||..::.|:.  :.....:..||:..:.....::
  Fly   710 SHKSAT----------PAPLQRSLV--NGSIEPIYENVPLP--QRASGGSSGAANTEAMRQRASS 760

  Fly  1064 TQGKIDGLVPGNHYIFRIQAKSALGYGAEREHIQTMPILAPPVPEPSVTPLEVSRTSSTIEISFR 1128
            .| ...|:||       :.|    ...|...::.|:.:.:|| .:.::......|.:|| |:.|.
  Fly   761 IQ-SAPGVVP-------VPA----ARNASSNNVVTVTVNSPP-DDGNIKKYGADRAAST-ELLFL 811

  Fly  1129 QGYFSNAHGMVRSYTIIIAEDVG--------KNASGLEMPSWQDV---QAYTVWLPYQAIEPYNP 1182
            :...........|    .|.|:|        ::.:.|...|..|:   ...|:...:.|:.    
  Fly   812 EPQAPKRTNRAAS----AAPDMGATPPPRQHRSTASLNKSSTVDMITPAGDTLQQQFSAMN---- 868

  Fly  1183 FLTSNGSRKSSLEAEHFTIGTANCDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPIT 1247
             |::|.|..:|      ::..:..|...:...:..|:     |.|...|....|..|...|:.:.
  Fly   869 -LSANTSASTS------SMFNSTLDTTSSSAASKDLK-----RKKRWNFLSRSKTPDKQKSATLG 921

  Fly  1248 TERSDTVIVAATVSAVLLVAMVLVVVYCQHRCQLIRRASKLARMQDELAALPEGYIT-PNRPVHV 1311
            .|::.|.                    .||.    :.|:||...||:| .||..:.| .|:|..:
  Fly   922 REKATTA--------------------GQHS----KLAAKLKLAQDDL-NLPNRWSTGVNKPQPI 961

  Fly  1312 KD-FSEHYRIMSAD---SDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKL 1372
            .. :|:.......|   ||.:...|||.:...........|.|..|.|||...|.||||.:|.:|
  Fly   962 SGRYSKDKLCQILDQKLSDSQLFMEFERIPKRREHALYECALLEENEPKNHDPNFLPYDDNRVRL 1026

  Fly  1373 QPVDDDDGSDYINANYMPG--HNSPREFIVTQGPLHS-TREEFWRMCWESNSRAIVMLTRCFEKG 1434
            .|. .|:...|:||:.:..  ....|.:||.|.|... |...||:..||::...:|.||...   
  Fly  1027 TPC-RDNRHGYVNASSISATVGTKQRFYIVAQSPQEPLTMRIFWQCVWEADVYLVVQLTEDM--- 1087

  Fly  1435 REKCDQYWPVD-RVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNCESRIMRHFH----------- 1487
                 .|.|.: ...:.:|..:|       |.::|    ..:..|.:..:|.:|           
  Fly  1088 -----SYIPRNSHQRLEFGQFQV-------YQEFS----QTTDRCTTIKLRLYHVPSRRYRSVWY 1136

  Fly  1488 --FTTWPDFGVPEPPQSLVRFVRAFRDVIGTDMR----------PIIVHCSAGVGRSGTFIALDR 1540
              :..|.:...|......:.|:.....|.....:          |:::||..|.||||..:..|.
  Fly  1137 LQYADWAEQNCPRDVNHFLDFLEELNSVRLASTQEVPPGHNTNPPVLLHCLEGGGRSGVTLTADL 1201

  Fly  1541 ILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLE 1586
            :|..:..::.:||..::..:|.:|..::.:..||..|:..|:..|:
  Fly  1202 LLYTLDHNEDLDIPRVIGQLRHQRDSIIPSLAQYKFIYNLLITYLK 1247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020 7/18 (39%)
fn3 247..328 CDD:278470 24/100 (24%)
fn3 343..417 CDD:278470 14/81 (17%)
fn3 443..525 CDD:278470 7/81 (9%)
FN3 548..611 CDD:238020 11/68 (16%)
FN3 620..706 CDD:238020 22/98 (22%)
fn3 708..796 CDD:278470 13/87 (15%)
fn3 824..886 CDD:278470 6/61 (10%)
fn3 902..978 CDD:278470 9/75 (12%)
fn3 1013..1092 CDD:278470 14/78 (18%)
UP_III_II 1106..>1248 CDD:297589 26/152 (17%)
PTPc 1329..1582 CDD:214550 64/279 (23%)
PTPc 1355..1582 CDD:238006 58/253 (23%)
PezNP_001260127.1 B41 26..230 CDD:214604 24/82 (29%)
FERM_N 26..93 CDD:286467
FERM_M 114..230 CDD:278785 24/82 (29%)
FERM_C_PTPN14_PTPN21 225..317 CDD:270009 21/103 (20%)
Y_phosphatase 1007..1243 CDD:278528 59/255 (23%)
PTPc 1009..1243 CDD:238006 58/253 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443508
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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