Sequence 1: | NP_001162669.1 | Gene: | Ptp4E / 31425 | FlyBaseID: | FBgn0004368 | Length: | 1767 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001359063.1 | Gene: | Ptprb / 314843 | RGDID: | 1305922 | Length: | 2000 | Species: | Rattus norvegicus |
Alignment Length: | 1713 | Identity: | 481/1713 - (28%) |
---|---|---|---|
Similarity: | 751/1713 - (43%) | Gaps: | 319/1713 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 78 VPNASSNANAF-------YRIDYSPPFG---------FPEP----NTTIPASDIGKDIKFSRALP 122
Fly 123 GTEYNFWLYYTNSTHREQLTWTVNI--------TTAPDPPANLSVQLRSSKSAFITWRPPGSGRY 179
Fly 180 SGFRIRVLGLTDLPFERSYSLEGNETLQLSAKELTPGGSYQV----------QAYSVY------- 227
Fly 228 --------QGKESVAYTS-----------------RNFTTKPNTPGKFIVWF------------- 254
Fly 255 ----------------------------------RNETTLLVLWQPPFPAGIYTHYRVSITPDD- 284
Fly 285 AIQSVLYVEREGEPPGPAQAAFKGLVPGREYNISVQTVSEDETSSVPTTARYLTVPERVLNVTFD 349
Fly 350 EAYTTSSSFRVRWEPPRTYSEFDAYQVMLSTSRRIF----NVPRAANGDSVYFDYPDILEPGRTY 410
Fly 411 EVVVKTIADNVNSWPASGEVTLR--PRPVRSLGGFLDDRSNALHISWEPAETGRQDSYRISYHEQ 473
Fly 474 TNASEVPAPFPVAAESQITTNLTEYTLDSLLAGRRYLIAVQALSKGVASNASDITRYTRPAAPLI 538
Fly 539 QELRSIDQG----LMLSWR---SDVNSRQDRYEVH-YQRNGTREERTMATNETSLTIHYLHPGSG 595
Fly 596 YEVKVHAISHGVRSEPHSYFQAVFPKPPQNLTLQTVH-TNLVVLHWQAPEGSD-------FSEYV 652
Fly 653 VRYRTDASPWQRISGLHENEARIKDMHYGERYLVQVNTVSFGVESPHPLELNVTMPPQPVSNV-V 716
Fly 717 PLVDSRNLTLEWPRPDGHVDFYTLKWWPTDE--EDRVEFKNVTQLEDLSSPSVRIPIEDLSPGRQ 779
Fly 780 YRFEVQASSNGIRSGTTHLSTRTMPLIQSDVFIANAGHEQGQDETIT----LSYTPTPADSTRFD 840
Fly 841 IYRFSMGDPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVSGGVASLPVQRLYRLHPLPISD 905
Fly 906 LKAIQVAAREITLHWTAPAG--EYTDFELQYLSADEEAPQLLQNVTKNTEITLQGLRPYHNYTFT 968
Fly 969 VVVRSGSIQGTDFADVSVSTLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPGEVTFEWSLEPAE 1033
Fly 1034 QHGPIDYFRITCQNADDAADVSSYEFPVNATQGK----IDGLVPGNHYIFRIQAKSALGYGAERE 1094
Fly 1095 HIQTMPIL---APPVPEPSVTPLEVSRTSSTIEISFRQGYFSNAHGMVRSYTIIIAEDVGKNASG 1156
Fly 1157 LE---------MPSWQD------VQAY-TVWLPYQAIEPYNPFLTSNGSRKSSLEAEHFTIGTAN 1205
Fly 1206 CDKHQAGYCNGPLRAGTTYRIKIRAFT---DE--DKFT-----DTVYSSPITTERSDTVIVAATV 1260
Fly 1261 SA-VLLVAMVLVVV---YCQHRCQLIRRAS--KLARMQDELAAL-----PEGYITPNRPVHVKDF 1314
Fly 1315 SEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDD 1379
Fly 1380 GSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPV 1444
Fly 1445 DRVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNCES------RIMRHFHFTTWPDFGVPEPPQSL 1503
Fly 1504 VRFVRAFRDVIGTD--MRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVF 1566
Fly 1567 MVQTEQQYVCIHQCLLAVLEGKE 1589 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptp4E | NP_001162669.1 | FN3 | 151..242 | CDD:238020 | 24/132 (18%) |
fn3 | 247..328 | CDD:278470 | 24/128 (19%) | ||
fn3 | 343..417 | CDD:278470 | 19/77 (25%) | ||
fn3 | 443..525 | CDD:278470 | 22/81 (27%) | ||
FN3 | 548..611 | CDD:238020 | 16/66 (24%) | ||
FN3 | 620..706 | CDD:238020 | 19/93 (20%) | ||
fn3 | 708..796 | CDD:278470 | 19/90 (21%) | ||
fn3 | 824..886 | CDD:278470 | 19/65 (29%) | ||
fn3 | 902..978 | CDD:278470 | 25/77 (32%) | ||
fn3 | 1013..1092 | CDD:278470 | 18/82 (22%) | ||
UP_III_II | 1106..>1248 | CDD:297589 | 47/167 (28%) | ||
PTPc | 1329..1582 | CDD:214550 | 144/260 (55%) | ||
PTPc | 1355..1582 | CDD:238006 | 129/234 (55%) | ||
Ptprb | NP_001359063.1 | fn3 | 113..195 | CDD:365830 | |
FN3 | 204..273 | CDD:214495 | |||
fn3 | 292..365 | CDD:365830 | |||
fn3 | 394..455 | CDD:365830 | 11/70 (16%) | ||
fn3 | 470..542 | CDD:365830 | 16/75 (21%) | ||
fn3 | 645..723 | CDD:365830 | 23/86 (27%) | ||
fn3 | 733..809 | CDD:365830 | 20/87 (23%) | ||
fn3 | 822..895 | CDD:365830 | 24/83 (29%) | ||
fn3 | 909..982 | CDD:365830 | 15/78 (19%) | ||
fn3 | 1009..1077 | CDD:365830 | 17/73 (23%) | ||
fn3 | 1088..1161 | CDD:365830 | 16/82 (20%) | ||
fn3 | 1176..1249 | CDD:365830 | 21/75 (28%) | ||
fn3 | 1263..1341 | CDD:365830 | 25/77 (32%) | ||
fn3 | 1357..1436 | CDD:365830 | 19/87 (22%) | ||
PTP_tm | 1460..1648 | CDD:376280 | 56/194 (29%) | ||
R-PTPc-B | 1734..1961 | CDD:350465 | 125/229 (55%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 285 | 1.000 | Domainoid score | I1546 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 564 | 1.000 | Inparanoid score | I1035 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D16347at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001181 | |
OrthoInspector | 1 | 1.000 | - | - | otm44977 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106915 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X4185 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.870 |