| Sequence 1: | NP_001162669.1 | Gene: | Ptp4E / 31425 | FlyBaseID: | FBgn0004368 | Length: | 1767 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038962690.1 | Gene: | Col20a1 / 311716 | RGDID: | 1563901 | Length: | 1367 | Species: | Rattus norvegicus |
| Alignment Length: | 1031 | Identity: | 199/1031 - (19%) |
|---|---|---|---|
| Similarity: | 331/1031 - (32%) | Gaps: | 326/1031 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 139 EQLTWT-VNITTAP--DPPANLSVQLR----SSKSAFITWR-PPGSGRYSGFRIRVLGLT-DLPF 194
Fly 195 ERSYSLEGNETLQLSAKELTPGGSYQVQAYSVYQG----------------KESVAYTSRNFTTK 243
Fly 244 PNTPGKF-------------IVWFRNETTLLVLW-----QPPFPAGIYTHYRVSITPDDAIQS-- 288
Fly 289 VLYVEREGE---------PPGPAQAAFKGLVPG------------REYNISVQT----------V 322
Fly 323 SEDETSSVPTTARYLT---VPERVLNVTFDEAYTTSSSFR-----------------VRWEPPRT 367
Fly 368 Y-------SEFD---AYQVMLSTSRRIFNVPRAANGDSV----------------YFDYPDI--L 404
Fly 405 EPGRTYEVVVKTIADNVNS----WPASGEVTLRPRPVRSLGGFLDDRSNALHISWEPAETGRQDS 465
Fly 466 Y-RISYHEQTNASEVPAPFPVAAESQITTNLTEYTLDSLLAGRRYLIAV-----QALSKGVASNA 524
Fly 525 SDITRYTRPAAPLIQELRSI-DQGLMLSWRSDVNSRQDRYEVHY---QRNGTREERTMATNETSL 585
Fly 586 TIHYLHPGSGYEVKVHAISHGVRSEPHS-YFQAVFPKPPQNLTLQTVHTNLVVLHWQA------- 642
Fly 643 ------PEGSDFSEYVVRYRTDASPWQRISGLHENEARIKDMHYGERYLVQVNTVSFG----VES 697
Fly 698 PHPLELNVTMPPQPVSNVVPLVDSRNLTLEW-PRPDGHVDFYTLKWWPTDEEDRVEFKNVTQLED 761
Fly 762 LSSPSVRIPIEDLSPGRQYRFEVQASSNGIRSGTTHLSTRTMP----LIQSDVFIANAGHEQGQD 822
Fly 823 ETITLSYTPTPADSTRFDIYRFSMGDPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVSGGV 887
Fly 888 ASLPVQRLYRLHPLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADEEAPQLLQNVTKNT 952
Fly 953 EITLQGLRPYHNYTFTVVVRSGSIQGTDFADVSVSTLMRS--SAPISASYQTLTAP 1006 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Ptp4E | NP_001162669.1 | FN3 | 151..242 | CDD:238020 | 24/114 (21%) |
| fn3 | 247..328 | CDD:278470 | 25/131 (19%) | ||
| fn3 | 343..417 | CDD:278470 | 19/118 (16%) | ||
| fn3 | 443..525 | CDD:278470 | 18/87 (21%) | ||
| FN3 | 548..611 | CDD:238020 | 17/65 (26%) | ||
| FN3 | 620..706 | CDD:238020 | 20/102 (20%) | ||
| fn3 | 708..796 | CDD:278470 | 12/88 (14%) | ||
| fn3 | 824..886 | CDD:278470 | 11/61 (18%) | ||
| fn3 | 902..978 | CDD:278470 | 15/75 (20%) | ||
| fn3 | 1013..1092 | CDD:278470 | |||
| UP_III_II | 1106..>1248 | CDD:297589 | |||
| PTPc | 1329..1582 | CDD:214550 | |||
| PTPc | 1355..1582 | CDD:238006 | |||
| Col20a1 | XP_038962690.1 | vWA_collagen_alphaI-XII-like | 222..386 | CDD:238759 | 28/165 (17%) |
| fn3 | 423..501 | CDD:394996 | 18/87 (21%) | ||
| fn3 | 522..586 | CDD:394996 | 16/65 (25%) | ||
| fn3 | 603..671 | CDD:394996 | 12/67 (18%) | ||
| fn3 | 692..768 | CDD:394996 | 22/125 (18%) | ||
| fn3 | 797..865 | CDD:394996 | 21/124 (17%) | ||
| LamG | 887..1081 | CDD:419873 | |||
| Collagen | 1172..1215 | CDD:396114 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||