DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and Ptpn18

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_063122948.1 Gene:Ptpn18 / 301333 RGDID:1311586 Length:507 Species:Rattus norvegicus


Alignment Length:368 Identity:103/368 - (27%)
Similarity:162/368 - (44%) Gaps:49/368 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1311 VKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQA------CS--FANLPCNRPKNRFTNILPYDH 1367
            |:.|.|.............:.||.::|  .|..|      ||  ..:...|..|||:.:::|||.
  Rat     8 VRSFLEQQEARDHREGAILAREFSDIK--ARSVAWKTEGVCSTKAGSQQGNSKKNRYKDVVPYDE 70

  Fly  1368 SRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFE 1432
            :|..|..:.::...||||||::.|.:..:.:|.|||||..|..:|||:.||...:.|:|..:..|
  Rat    71 TRVILSLLQEEGHGDYINANFIRGTDGSQAYIATQGPLPHTLLDFWRLVWEFGVKVILMACQETE 135

  Fly  1433 KGREKCDQYWPVDRVAMFYGDIKVQLIIDTHY-HDWSISEFMVS------RNCESRIMRHFHFTT 1490
            .||.||::||..:|..:..|...:.|..:|.. .|.::....|:      ...|||.:....:.:
  Rat   136 NGRRKCERYWAQEREPLQAGPFCITLTKETALTADITLRTLQVTFQKVPKGQKESRPVHQLQYMS 200

  Fly  1491 WPDFGVPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDY---VD 1552
            |||.|||.....::..|...|.:.|....|:.||||||.||:|...|:|.:.|.:.....   ..
  Rat   201 WPDHGVPSSSDHILTMVEEARCLQGLGPGPLCVHCSAGCGRTGVLCAVDYVRQLLLTQTIPPNFS 265

  Fly  1553 IFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVL---------------EGKEHLLADSLELHAND 1602
            :|.:|..|||:|...||||:||..::..:..:.               |.:..:..||..|..:.
  Rat   266 LFEVVLEMRKQRPAAVQTEEQYRFLYHTVAQLFSRTLQNNSPLYQNLKENRAPICKDSSSLRTSS 330

  Fly  1603 GYEVT---------KIYLERQPQTKMGTLPIRASLAMAEKLDA 1636
            ....|         .|.:...|     |||:..:.|:.:|..|
  Rat   331 ALPATSRPLGGVLRSISVPGPP-----TLPMADTYAVVQKRGA 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 77/230 (33%)
Ptpn18XP_063122948.1 None
Blue background indicates that the domain is not in the aligned region.

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