DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and Ptpn22

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_001099930.1 Gene:Ptpn22 / 295338 RGDID:1307992 Length:804 Species:Rattus norvegicus


Alignment Length:356 Identity:112/356 - (31%)
Similarity:175/356 - (49%) Gaps:39/356 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1329 FSEEFEELKH------VGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINAN 1387
            |:.||.:||.      ..:....:.|..|.|..|||:.:|||||||..:|..:..|:.|.||||:
  Rat    24 FANEFLKLKRQSTKYKADKIYPTTVAQRPKNIKKNRYKDILPYDHSLVELSLLTSDEDSSYINAS 88

  Fly  1388 YMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYW--PVDRVAMF 1450
            ::.|...||.:|.|||||.:|..:||||.||.....|||....||.|::||::||  |.:....|
  Rat    89 FIKGVYGPRAYIATQGPLSTTLLDFWRMIWEYRVLVIVMACMEFEMGKKKCERYWAEPGETQLQF 153

  Fly  1451 YGDIKVQLIIDTHYHDWSISEFMVSRNCESRIMRHFHFTTWPDFGVP---EPPQSLVRFVRAFRD 1512
             |...:....:....|:.|.......|.|:||:..||:..|||..||   :|...|:..:|.:::
  Rat   154 -GPFSISCETEKKKSDYKIRTLKAKFNSETRIVYQFHYKNWPDHDVPSSIDPILQLIWDMRCYQE 217

  Fly  1513 VIGTDMRPIIVHCSAGVGRSGTFIALD---RILQH--IHKSDYVDIFGIVFAMRKERVFMVQTEQ 1572
               .|..|:.:|||||.||:|...|:|   .:|:.  |.|:  ..:|.::..||.:|..:|||::
  Rat   218 ---DDCVPLCIHCSAGCGRTGVICAVDYTWMLLKDGIIPKN--FSVFNLIQEMRTQRPSLVQTQE 277

  Fly  1573 QYVCIHQCLLAVLEGKEHLLADSLELHANDGYEVTKIYLERQPQTKMGTLPIRASLAMAEKLDAD 1637
            ||..::..:|.:.:....:::|:              :.||:.|.:. ::|.:.....|:....|
  Rat   278 QYELVYSAVLELFKRHVDIISDN--------------HREREIQAEC-SIPEQKLTIEADSYPLD 327

  Fly  1638 LMTNKDEDEDQEQQQQQQLQLA--TEVKPKG 1666
            ...|...|.....||.:|...|  |||...|
  Rat   328 FPKNAVRDAKMTNQQSKQGAEAESTEVSSFG 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 84/230 (37%)
Ptpn22NP_001099930.1 PTPc-N22 57..290 CDD:350450 87/238 (37%)
Herpes_BLLF1 <539..800 CDD:282904
Blue background indicates that the domain is not in the aligned region.

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