DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and pyp2

DIOPT Version :9

Sequence 1:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_594899.1 Gene:pyp2 / 2542200 PomBaseID:SPAC19D5.01 Length:711 Species:Schizosaccharomyces pombe


Alignment Length:575 Identity:148/575 - (25%)
Similarity:237/575 - (41%) Gaps:155/575 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1098 TMPILAP-PVPEPSVTPLEVSRTSSTIEISFRQGY-----------FSNAHGMVRSYTIIIAEDV 1150
            :.|:..| .:|.|..||..||.|.|  |.:....|           .|.....|||...|.    
pombe   171 SFPLRVPINIPPPLCTPSVVSDTFS--EFASHAEYPGFSGLTPFSIHSPTASSVRSCQSIY---- 229

  Fly  1151 GKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLEAE--HFTIGTANCDKHQAGY 1213
               .|.|..|:    .|:...:||   .|.:|.::...|..|:.:.:  .|.:|.|    .|...
pombe   230 ---GSPLSPPN----SAFQAEMPY---FPISPAISCASSCPSTPDEQKNFFIVGNA----PQQTP 280

  Fly  1214 CNGPLRAGTTY----------RIKIRAFTDEDKFTDTVYSSPITTERSDTVIV------------ 1256
            ....||:..:|          ..::|:|::..|.::.|  :|..::.|..:|.            
pombe   281 ARPSLRSVPSYPSSNNQRRPSASRVRSFSNYVKSSNVV--NPSLSQASLEIIPRKSMKRDSNAQN 343

  Fly  1257 --AATVSAVLLVAMVLVVVYCQHRCQLIRRASKLARMQDELAALPEGYITPNRPVHVKD-----F 1314
              .:|:::.|                  :.:..|:..:|  |..|.|....|:|...|:     |
pombe   344 DGTSTMTSKL------------------KPSVGLSNTRD--APKPGGLRRANKPCFNKETKGSIF 388

  Fly  1315 SEHYR-----------------------IMSADSDFRFS--EEFEELKHVG-RDQACSFANLPCN 1353
            |:..:                       :.:|...::|.  ||.|..:.:. .|....:..|..:
pombe   389 SKENKGPFTCNPWGAKKVSPPPCEVLADLNTASIFYKFKRLEEMEMTRSLAFNDSKSDWCCLASS 453

  Fly  1354 RP-----KNRFTNILPYDHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFW 1413
            |.     |||:|:|:|||.:|.:|  ......||||||:::...|  :::|..|.|...|..:||
pombe   454 RSTSISRKNRYTDIVPYDKTRVRL--AVPKGCSDYINASHIDVGN--KKYIACQAPKPGTLLDFW 514

  Fly  1414 RMCWESN--SRAIVMLTRCFEKGREKCDQYWP--VDRVAMFYGDIKV---------QLIIDTHYH 1465
            .|.|.::  :..|||||..:|.|.|||.||||  .|......|.:::         .|.::||. 
pombe   515 EMVWHNSGTNGVIVMLTNLYEAGSEKCSQYWPDNKDHALCLEGGLRISVQKYETFEDLKVNTHL- 578

  Fly  1466 DWSISEFMVSR-NCESRIMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGV 1529
                  |.:.: |...:.:.||...||.|...|: .:|:...:|.. |.:..| .|:.|||||||
pombe   579 ------FRLDKPNGPPKYIHHFWVHTWFDKTHPD-IESITGIIRCI-DKVPND-GPMFVHCSAGV 634

  Fly  1530 GRSGTFIALDRILQHIHKS---------DYVD-IFGIVFAMRKERVFMVQTEQQY 1574
            ||:|||||:|:||| :.|:         |..| ||..|.::|.:|:.|||..:|:
pombe   635 GRTGTFIAVDQILQ-VPKNILPKTTNLEDSKDFIFNCVNSLRSQRMKMVQNFEQF 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020
fn3 247..328 CDD:278470
fn3 343..417 CDD:278470
fn3 443..525 CDD:278470
FN3 548..611 CDD:238020
FN3 620..706 CDD:238020
fn3 708..796 CDD:278470
fn3 824..886 CDD:278470
fn3 902..978 CDD:278470
fn3 1013..1092 CDD:278470
UP_III_II 1106..>1248 CDD:297589 37/164 (23%)
PTPc 1329..1582 CDD:214550 94/278 (34%)
PTPc 1355..1582 CDD:238006 87/249 (35%)
pyp2NP_594899.1 DSP_MapKP 4..129 CDD:238723
COG5599 405..709 CDD:227886 95/299 (32%)
PTPc 461..697 CDD:238006 87/243 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3031
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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