DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and Ptpra

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_006235068.1 Gene:Ptpra / 25167 RGDID:3450 Length:805 Species:Rattus norvegicus


Alignment Length:581 Identity:173/581 - (29%)
Similarity:269/581 - (46%) Gaps:114/581 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1109 PSVTPLEVSRTSSTIEISFRQGYFSNAHGMVRSYTIIIAEDVGKNASGLEMPSWQDVQAYTVWLP 1173
            ||:....:.:||:| |.:..:...||:...|.|.::              .|:            
  Rat    27 PSLGTTRLIKTSTT-ESAKEENKTSNSTSSVISLSV--------------TPT------------ 64

  Fly  1174 YQAIEPYNPFLTSNGSRKSSLEAEHFTIGTANCDKHQAGYCNGPLRAGTTYRIK--IRAFTDEDK 1236
                  ::|.||...:..:::.:.|...||......::|        |||....  ...:..:::
  Rat    65 ------FSPNLTLEPTYVTTVNSSHSDNGTKRAASTESG--------GTTISPNGTYGTWLTDNQ 115

  Fly  1237 FTD-----------TVYSSPIT----------TERSDTVIVAATV--SAVLLVAMVLVVVYCQHR 1278
            |||           |..::|.|          ..|.:|.|:|..|  |::|::..:::|:| ..|
  Rat   116 FTDARTEPWEGNSSTAATTPETFPPAGNSDSKDRRDETPIIAVMVALSSLLVIVFIIIVLY-MLR 179

  Fly  1279 CQLIRRAS------KLARMQDE---------LAALPEGYITPNR---PVHVKDFSEHYRIMSADS 1325
            .:..::|.      :|:..:.|         ||..|    :.||   |:.|....|......||.
  Rat   180 FKKYKQAGSHSNSFRLSNGRTEDVEPQSVPLLARSP----STNRKFPPLPVDKLEEEINRRMADD 240

  Fly  1326 DFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINANYMP 1390
            :..|.|||..|........|..|:...|:.|||:.|||||||||..|.||:....||||||:::.
  Rat   241 NKLFREEFNALPACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFIN 305

  Fly  1391 GHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPVDRVAMFYGDIK 1455
            |:....:||..|||...|..:||||.||.|:..|||:|...|:...||.|||| |:....||:::
  Rat   306 GYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQYWP-DQGCWTYGNVR 369

  Fly  1456 VQLIIDTHYHDWSISEFM------VSRNCESRIMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVI 1514
            |.:...|...|:::.:|.      |:.....|::..||||:|||||||..|..:::|::..:...
  Rat   370 VSVEDVTVLVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACN 434

  Fly  1515 GTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQ 1579
            ......|:|||||||||:|||:.:|.:|..:|....||::|.|..:|.:|..||||:.|||.|:|
  Rat   435 PQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQ 499

  Fly  1580 CLLA-VLEGKEHLLADSLELH-----------ANDGYE-----VTKIYLERQPQTKMGTLP 1623
            .||. .|.|...|...||:.|           :|:|.|     :|.|.::.. :.:.|.||
  Rat   500 ALLEHYLYGDTELEVTSLDTHLQKIYNKIPGTSNNGLEEEFKKLTSIKIQND-KMRTGNLP 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889 20/132 (15%)
R3-PTPc 1358..1579 CDD:350396 96/226 (42%)
PtpraXP_006235068.1 PHA03255 <18..177 CDD:165513 36/191 (19%)
R-PTPc-A-1 217..512 CDD:350469 118/295 (40%)
R-PTPc-A-2 566..793 CDD:350471
Blue background indicates that the domain is not in the aligned region.

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