DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and Ptprq

DIOPT Version :9

Sequence 1:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_001357916.1 Gene:Ptprq / 237523 MGIID:1096349 Length:2301 Species:Mus musculus


Alignment Length:1784 Identity:448/1784 - (25%)
Similarity:713/1784 - (39%) Gaps:458/1784 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 YYQNSQ--------------QQQKHFVWLVVGILTIFLAQHANAADLVINVPNA-----SSNANA 87
            :|||:.              ...|.:....:.|.:.....|.|.:..:::|..:     |:..|.
Mouse   703 FYQNADALFVKNTSTTNITLSDLKPYTLYNISIQSYTRLGHGNQSSSLLSVRTSETVPDSAPENI 767

  Fly    88 FYR--------IDYSPPFGFPEPNTTIPASDIGKDIKFSRALPGTEYNFWLYYTNSTHREQLTWT 144
            .|:        |.:.||   ..||..|                 .:|..:|..:|| |..:...|
Mouse   768 TYKNISSEEIEIFFLPP---RSPNGII-----------------QKYTIYLKRSNS-HEARTIET 811

  Fly   145 VNIT-------------------------------------TAPD-PPANLSVQLRSSKSAFITW 171
            .::|                                     .||| ||.|.||:..|..:..::|
Mouse   812 TSLTLTIGGLKKYTHYVIEVSASTLKGEGVRSMPISILTEEDAPDSPPQNFSVKQLSGVTVMLSW 876

  Fly   172 RPP--GSGRYSGFRIRV---------------LGLTDLPFERSYSLEGNETLQLSAKELTPGGSY 219
            :||  .:|....:.:.|               |.|:||.:...||                  :|
Mouse   877 QPPLEPNGIILYYTVYVWDKVSLKTINATEVSLELSDLDYHADYS------------------AY 923

  Fly   220 QVQAYSVYQGK--ESVAYTSRNFTT---KPNTPGKFIVWFR-NETTLLVLWQPPF-PAGIYTHYR 277
            ...:.....||  .||.    ||.|   :|:.|.|.:.:.. :.:::::.|.||. |.||..:|.
Mouse   924 VTASTRFGDGKTRSSVI----NFRTPEGEPSDPPKDVHYVNLSSSSIILFWTPPVKPNGIIQYYS 984

  Fly   278 V--SITPDDAIQSVLYVEREGEPPGPAQAAFKGLVPGREYNISV-------QTVSE-----DETS 328
            |  ..|....:|:...:|...||....       |..|.|.::|       .|.|.     :::|
Mouse   985 VYYQNTSSTFVQNFTLLEVTQEPGNVT-------VSARIYKLAVFSYYTFWLTASTLVGNGNKSS 1042

  Fly   329 SVPTTARYLTVPE-RVLNVTFDEAYTTSSSFRVRWEPPRTYSEFDAYQVMLSTSR---RIFNVPR 389
            .|........:|| .|.|:|::.  .:|::..|.|.||...:....|.|.|:..:   |....|.
Mouse  1043 DVIHVYTDQDIPEGGVGNLTYES--LSSTAINVSWTPPSQPNGLVFYYVSLNLQQSPPRHRRPPL 1105

  Fly   390 AANGDSVYFD----YPDIL-------EPG--RTY--EVVVKTIADNVNSWPASGEVTLRPRPVRS 439
            ....:|:|||    |.|.:       |.|  .||  ::.:||..|..::.|.             
Mouse  1106 TTYENSIYFDNLEKYTDYIFKITPSTEKGFSETYTAQLHIKTEEDVPDTPPI------------- 1157

  Fly   440 LGGFLDDRSNALHISWEPAETGRQDSYRISYHEQTNASEVPAPFPVAAESQITTNLTEYTLDSLL 504
            :..|.:..|.::.:||:|..  :.:...:|||.....:.....|..:....:...|:.:||.|.|
Mouse  1158 INTFKNLSSTSILLSWDPPL--KPNGAILSYHLTLQGTHANRTFVTSGNHIVLEELSPFTLYSFL 1220

  Fly   505 AGRRYLIAVQALSKGVASNASDITRYTRPAAPLI--QELRSID---QGLMLSWRSD--------V 556
            |..|.:       ||:.. :|.:..||..:|||.  |.|..|:   ..:.|:|...        |
Mouse  1221 AAARTM-------KGLGP-SSILFFYTDESAPLAPPQNLTLINYTSDFVWLTWSPSPLPGGIVKV 1277

  Fly   557 NSRQDRYEVHYQRNGTREERTMATNETSLTIHYLHPGSGYEVKVHA---ISHGVRSEPHSYF--Q 616
            .|    :::|.....|...:.::..:|...:..|.|.|.|.:.|.|   :.:|.:......|  |
Mouse  1278 YS----FKIHEHETDTVFYKNISGFQTDAKLAGLEPVSTYSISVSAFTKVGNGNQFSNVVKFTTQ 1338

  Fly   617 AVFPKPPQNLTLQTVHTNLVVLHWQAPEGSDFSEYVVRY-------RTDASPWQRISGLHENEAR 674
            ...|...||:.........|.:.|..|..:  :..::.|       .|..||             
Mouse  1339 ESVPDAVQNIACVARDWQSVSVMWDPPRKA--NGIIIHYMITVEGNSTKVSP------------- 1388

  Fly   675 IKDMHY-------GERYLVQV---NTVSFGVESPHPLELNV-----TMPPQPVSNVVPLVDSRNL 724
             :|..|       ...|:.:|   .:...|.||    :.||     |:|..|.:.....|.|.::
Mouse  1389 -RDPMYTFTKLLANTSYIFEVRASTSAGEGNES----QCNVSTLPETVPSVPTNTAFSNVQSTSV 1448

  Fly   725 TLEWPRPD---GHVDFYTL----------KWWPTDEEDRVEFKNV------TQLEDLSSPSVRIP 770
            ||.|.:||   |:...|.:          :|.|   |:.||.:.|      .|.||        .
Mouse  1449 TLRWIKPDTILGYFQNYKITTQLRAQKCREWEP---EECVEHQEVQYLYEANQTED--------T 1502

  Fly   771 IEDLSPGRQYRFEVQASSN-GIRSGTTHLSTRTMPLIQSDVFIANAGHEQGQDETITLSYTPTPA 834
            :..|...:.|||:|.||:| |..:.::.:||:|:|           |...|..|.:.:..|    
Mouse  1503 VRGLKKFQWYRFQVAASTNAGYGNASSWISTQTLP-----------GPPDGPPENVRVVAT---- 1552

  Fly   835 DSTRFDIYRFSMGDPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVSGGVASLPVQRLYRLH 899
              :.|.| ..|..:|.|                  :|....|                       
Mouse  1553 --SPFGI-NISWNEPAI------------------ITGPTFY----------------------- 1573

  Fly   900 PLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADEEAPQLLQNVTKNTEITLQGLRPYHN 964
               :.|:|::                :..:|.:.::.::||        .|.|||  ..|..:..
Mouse  1574 ---LIDVKSV----------------DNDNFNISFVKSNEE--------NKTTEI--NDLEVFTR 1609

  Fly   965 YTFTVVVRSGSIQG--TD---FADVSVSTLMRSSAPISASYQTLTAPPGKVDYFQ-PSDVQPGEV 1023
            |:..:....|::.|  ||   .|:|.::||  .|.|        ..||..:.:.: |.:|...::
Mouse  1610 YSVVITAFVGNVSGAYTDGKSSAEVIITTL--ESVP--------KDPPNNMTFQKIPDEVTKFQL 1664

  Fly  1024 TFEWSLEPAEQHGPIDYFRITCQNADDAADVSSYEFPV-----NATQGKIDGLVPGNHYIFRIQA 1083
            :|   |.|::.:|.|..::......||...|..:...:     .:....::||..|:.|...:.|
Mouse  1665 SF---LPPSQPNGNIQVYQALVYREDDPTAVQIHNLSIIQKTDTSVIAMLEGLKGGHTYNISVYA 1726

  Fly  1084 KSALGYGAEREHIQTMPILAPPVPEPSVTPL-----EVSRTSSTIEISFRQGYFSNAHGMVRSYT 1143
            .::.|.|.:.:...||.|.||..|:....|:     ::..||:||.|.....|:::.||.:|:..
Mouse  1727 INSAGAGPKVQMRITMDIKAPARPKTKPIPIHDATGKLLVTSTTITIRMPICYYNDDHGPIRNVQ 1791

  Fly  1144 IIIAEDVGKNASGLEMPSWQDVQAYTVWLPYQAIEPY-------NPFLTSNGSRKSSLEAEHFTI 1201
            :::|| .|....| .:..|.|  ||     :....||       || ....|..|.|...|.:.|
Mouse  1792 VLVAE-AGAQQDG-NVTKWYD--AY-----FNKARPYFTNEGFPNP-PCIEGKTKFSGNEEIYVI 1846

  Fly  1202 GTANC---DKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPITT------ERSDTVIVA 1257
            |..|.   ..::...|||||:....|..|.||.....:|||:.||.||.|      ||:..:|::
Mouse  1847 GADNACMIPGNEEKICNGPLKPKKQYLFKFRATNVMGQFTDSEYSDPIKTLGEGLSERTVEIILS 1911

  Fly  1258 AT---VSAVLLVAMVLVV-----------VYCQHRCQLIRRASKL--------ARMQDELAALPE 1300
            .|   :|.:||...:...           .|.....::|....||        ..::||......
Mouse  1912 VTLCILSIILLGTAIFAFARIRQKQKEGGTYSPRDAEIIDTKFKLDQLITVADLELKDERLTRLL 1976

  Fly  1301 GYITPNRPVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPY 1365
            .|....:||..|.|.:|...:..:::.:|.|||.||....:|.:.:.|:||.||.||||.||.||
Mouse  1977 SYRKSIKPVSKKSFLQHVEELCTNNNLKFQEEFSELPKFLQDLSSTDADLPWNRAKNRFPNIKPY 2041

  Fly  1366 DHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRC 1430
            :::|.||.......|||||||:|:.|:..|.|||.|||||..|..:||||.||:.::.:||||:|
Mouse  2042 NNNRVKLIADVSIPGSDYINASYVSGYLCPNEFIATQGPLPGTVGDFWRMVWETRAKTLVMLTQC 2106

  Fly  1431 FEKGREKCDQYWPVD-RVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNCESRIMRHFHFTTWPDF 1494
            |||||.:|.||||.| :....:|||.:..:::....||:|.:..:.|:.:...:|..:||.||:.
Mouse  2107 FEKGRIRCHQYWPEDNKPVTVFGDILITKLMEDIQIDWTIRDLKIERHGDCMTVRQCNFTGWPEH 2171

  Fly  1495 GVPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFA 1559
            ||||....|:.||:..|.....|..|::|||||||||:|.|||||.:.||||..|:|||:|:|..
Mouse  2172 GVPENTTPLIHFVKLVRTSRAHDATPMVVHCSAGVGRTGVFIALDHLTQHIHDHDFVDIYGLVAE 2236

  Fly  1560 MRKERVFMVQTEQQYVCIHQCLLAVLEGK 1588
            :|.||:.|||...||:.:|||:|.:|..|
Mouse  2237 LRSERMCMVQNLAQYIFLHQCILDLLSNK 2265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020 26/110 (24%)
fn3 247..328 CDD:278470 21/96 (22%)
fn3 343..417 CDD:278470 24/91 (26%)
fn3 443..525 CDD:278470 18/81 (22%)
FN3 548..611 CDD:238020 14/73 (19%)
FN3 620..706 CDD:238020 19/107 (18%)
fn3 708..796 CDD:278470 29/107 (27%)
fn3 824..886 CDD:278470 8/61 (13%)
fn3 902..978 CDD:278470 12/75 (16%)
fn3 1013..1092 CDD:278470 17/84 (20%)
UP_III_II 1106..>1248 CDD:297589 46/156 (29%)
PTPc 1329..1582 CDD:214550 122/253 (48%)
PTPc 1355..1582 CDD:238006 110/227 (48%)
PtprqNP_001357916.1 FN3 57..151 CDD:238020
FN3 308..393 CDD:238020
fn3 399..>441 CDD:365830
FN3 570..654 CDD:238020
fn3 668..744 CDD:365830 5/40 (13%)
FN3 762..850 CDD:238020 16/108 (15%)
fn3 857..934 CDD:365830 18/94 (19%)
FN3 951..1049 CDD:238020 23/104 (22%)
FN3 1056..1137 CDD:238020 21/82 (26%)
FN3 1152..1233 CDD:238020 19/103 (18%)
FN3 1247..1337 CDD:238020 18/93 (19%)
FN3 1342..1421 CDD:238020 17/98 (17%)
FN3 1432..1535 CDD:238020 31/113 (27%)
FN3 1542..1638 CDD:238020 27/172 (16%)
FN3 1645..1734 CDD:238020 18/91 (20%)
UP_III_II 1759..1928 CDD:297589 52/178 (29%)
R-PTPc-Q 2033..2256 CDD:350464 106/222 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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