DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and Ptpre

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_001303607.1 Gene:Ptpre / 19267 MGIID:97813 Length:719 Species:Mus musculus


Alignment Length:485 Identity:161/485 - (33%)
Similarity:230/485 - (47%) Gaps:75/485 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1177 IEPYNPFLTSNGSRKSSLEAEHFTIGTANCDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTV 1241
            :||:.|.|.::           |::..|     :||..|     .||        ..|..:|.|.
Mouse    21 MEPFCPLLLAS-----------FSLSLA-----RAGQGN-----DTT--------PTESNWTSTT 56

  Fly  1242 YSSPITTERSDTVIVAATVSAVLLVAMVLVVVYCQHRCQLIRRA----------SKLARMQDE-- 1294
            ...|  ...:...::...:..:||:..:|...:.:.|.|  |:|          :.:...|::  
Mouse    57 AGPP--DPGASQPLLTWLLLPLLLLLFLLAAYFFRFRKQ--RKAVVSSNDKKMPNGILEEQEQQR 117

  Fly  1295 ---LAALPEGYITPNR--PVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNR 1354
               |:..|.|   |.:  |:.|:...|..|:.|||...||.|||..|...........||...||
Mouse   118 VMLLSRSPSG---PKKFFPIPVEHLEEEIRVRSADDCKRFREEFNSLPSGHIQGTFELANKEENR 179

  Fly  1355 PKNRFTNILPYDHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWES 1419
            .|||:.||||.||.|..|..||....||||||:|:.|:....:||..|||...|..:||||.||.
Mouse   180 EKNRYPNILPNDHCRVILSQVDGIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQ 244

  Fly  1420 NSRAIVMLTRCFEKGREKCDQYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMV----SRNCES 1480
            .|..|||||...|:..|||.|||| |:....||:|:|.:.......|::|.:|.:    ..:|::
Mouse   245 RSATIVMLTNLKERKEEKCYQYWP-DQGCWTYGNIRVCVEDCVVLVDYTIRKFCIHPQLPDSCKA 308

  Fly  1481 -RIMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQH 1544
             |::...|||:|||||||..|..:::|::..:.:..:...||:|||||||||:||||.:|.::..
Mouse   309 PRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNPSHAGPIVVHCSAGVGRTGTFIVIDAMMDM 373

  Fly  1545 IHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLA-VLEGKEHLLADSLELHANDGYEVT- 1607
            ||....||:|..|..:|.:|..||||:.||..|:|.||. .|.|...|...|||.|....:... 
Mouse   374 IHSEQKVDVFEFVSRIRNQRPQMVQTDVQYTFIYQALLEYYLYGDTELDVSSLERHLQTLHSTAT 438

  Fly  1608 ---KIYLERQ-----------PQTKMGTLP 1623
               ||.||.:           ...:.|.||
Mouse   439 HFDKIGLEEEFRKLTNVRIMKENMRTGNLP 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889 15/69 (22%)
R3-PTPc 1358..1579 CDD:350396 98/225 (44%)
PtpreNP_001303607.1 R-PTPc-E-1 184..412 CDD:350468 99/228 (43%)
PTP_DSP_cys 499..708 CDD:475123
Blue background indicates that the domain is not in the aligned region.

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