DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and Ptpra

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_036015592.1 Gene:Ptpra / 19262 MGIID:97808 Length:838 Species:Mus musculus


Alignment Length:597 Identity:177/597 - (29%)
Similarity:273/597 - (45%) Gaps:113/597 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1109 PSVTPLEVSRTSSTIEISFRQGYFSNAHGMVRSYTIIIAEDVGKNASGLEMPSWQDVQAYTVWLP 1173
            ||:....:.:||:| |::..:...||:...|.|.::              .|::.         |
Mouse    27 PSLGTTRLIKTSTT-ELAKEENKTSNSTSSVISLSV--------------APTFS---------P 67

  Fly  1174 YQAIEP-----YNPFLTSNGSRKSS----------------------------LEAEHFTIGTAN 1205
            ...:||     .|...:.||:|:::                            .|....|..|..
Mouse    68 NLTLEPTYVTTVNSSHSDNGTRRAASTESGGTTISPNGSWLIENQFTDAITEPWEGNSSTAATTP 132

  Fly  1206 CDKHQAGYCNG-PLRAGTTYRI----KIRAFTDEDKFTDTVYSSPITTERSD-TVIVAATV--SA 1262
            .....||...| |.....::..    ::.||:.....:..|.|:..:.:|.| |.|:|..|  |:
Mouse   133 ETFPPAGMARGLPSHQEPSHSYIACHRMTAFSSAWAHSPNVISNSDSKDRRDETPIIAVMVALSS 197

  Fly  1263 VLLVAMVLVVVYCQHRCQLIRRAS------KLARMQDE---------LAALPEGYITPNR---PV 1309
            :|::..:::|:| ..|.:..::|.      :|:..:.|         ||..|    :.||   |:
Mouse   198 LLVIVFIIIVLY-MLRFKKYKQAGSHSNSFRLSNGRTEDVEPQSVPLLARSP----STNRKYPPL 257

  Fly  1310 HVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQP 1374
            .|....|......||.:..|.|||..|........|..|:...|:.|||:.|||||||||..|.|
Mouse   258 PVDKLEEEINRRMADDNKLFREEFNALPACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLTP 322

  Fly  1375 VDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCD 1439
            |:....||||||:::.|:....:||..|||...|..:||||.||.|:..|||:|...|:...||.
Mouse   323 VEGVPDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCA 387

  Fly  1440 QYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFM------VSRNCESRIMRHFHFTTWPDFGVPE 1498
            |||| |:....||:::|.:...|...|:::.:|.      |:.....|::..||||:|||||||.
Mouse   388 QYWP-DQGCWTYGNVRVSVEDVTVLVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSWPDFGVPF 451

  Fly  1499 PPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKE 1563
            .|..:::|::..:.........|:|||||||||:|||:.:|.:|..:|....||::|.|..:|.:
Mouse   452 TPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQ 516

  Fly  1564 RVFMVQTEQQYVCIHQCLLA-VLEGKEHLLADSLELH-----------ANDGYE-----VTKIYL 1611
            |..||||:.|||.|:|.||. .|.|...|...|||.|           :|:|.|     :|.|.:
Mouse   517 RCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETHLQKIYNKIPGTSNNGLEEEFKKLTSIKI 581

  Fly  1612 ERQPQTKMGTLP 1623
            :.. :.:.|.||
Mouse   582 QND-KMRTGNLP 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889 23/157 (15%)
R3-PTPc 1358..1579 CDD:350396 96/226 (42%)
PtpraXP_036015592.1 R-PTPc-A-1 250..545 CDD:350469 118/295 (40%)
R-PTPc-A-2 599..826 CDD:350471
Blue background indicates that the domain is not in the aligned region.

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