DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and T28F4.3

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_492100.1 Gene:T28F4.3 / 189059 WormBaseID:WBGene00012138 Length:490 Species:Caenorhabditis elegans


Alignment Length:345 Identity:95/345 - (27%)
Similarity:178/345 - (51%) Gaps:41/345 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1356 KNRFTNILPYDHSRFKLQPVDDDDGSDYINANYM---PGHNSPREFIVTQGPLHSTREEFWRMCW 1417
            |||:.:|...|.:|..|:  :.|..:|||:|::|   .|.    :||.||||:.:|..:||.|.:
 Worm    87 KNRYRHIFCGDDNRVVLK--ERDPSNDYIHASWMVMPDGF----QFISTQGPIKNTIADFWHMVY 145

  Fly  1418 ESNSRAIVMLTRCFEKGREKCDQYWPVDRVAMFYGDIKVQLIIDTHYHDWS---ISEFMV-SRNC 1478
            ......||||.:..|:.:|||.:|:. |.....|||.:|: :::.....|:   ::...| .:||
 Worm   146 TEKCHVIVMLCQYIEEDQEKCQRYFS-DTSEKEYGDYRVK-VVEKTVELWNPVKVTGIQVQKKNC 208

  Fly  1479 ESR-IMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIA--LDR 1540
            .:: ::.|:.:..|.|...|..|..:::..:|..:  .:..:||:|||||||||:.||:.  |.:
 Worm   209 PTKHMVYHYFYYDWHDQVAPLDPAPMIKMYKAVLN--KSSSKPIVVHCSAGVGRTSTFVGIYLSQ 271

  Fly  1541 ILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGKEHLLADSLELHANDGYE 1605
            |:  |.::..||:..|:..:|..|:..||::.|||.:   ::.::|    |..|...:..|..||
 Worm   272 IM--IRENSSVDMVEILKRLRTMRLGAVQSQLQYVYL---VVLMIE----LFIDDKIIKRNANYE 327

  Fly  1606 -VTKIYLERQPQTKMGTLPIRASLAMAEKLDADLMTNKDEDEDQEQQQQQQLQLATEVKPKGSND 1669
             :.|.|.:         :..:.:.|:.|:.:......|.|:|.:::|:::  ..||:.:.|..|.
 Worm   328 SLLKKYAD---------VTRKVTAAIMEEEEKRRQRKKREEEKEKEQEKE--SPATKEEKKKENG 381

  Fly  1670 DEEDEEDDDDDDDDQQPLNN 1689
            .:.:.:.|:.:...:.|..|
 Worm   382 LKTNRQRDNREAPSKPPRKN 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 72/230 (31%)
T28F4.3NP_492100.1 PTPc 58..312 CDD:214550 74/239 (31%)
Blue background indicates that the domain is not in the aligned region.

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