DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp4E and K07F5.8

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_501766.1 Gene:K07F5.8 / 177833 WormBaseID:WBGene00010636 Length:284 Species:Caenorhabditis elegans


Alignment Length:293 Identity:82/293 - (27%)
Similarity:140/293 - (47%) Gaps:44/293 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1321 MSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGS---D 1382
            |...:||...:.|::.:..|               |||:.::...|::|.||      .|:   :
 Worm     1 MKRFNDFSKMKAFKDAQEHG---------------KNRYKDVGCLDNNRVKL------GGAWPHE 44

  Fly  1383 YINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPVD-- 1445
            ||:|||:....:|:.||.||.||..|..:||.||.:.....|.||....|||.:||.:|.|.:  
 Worm    45 YIHANYVSTPTNPKRFICTQAPLEKTCADFWFMCLQDRVETIFMLCNYKEKGAKKCHEYLPTEDN 109

  Fly  1446 RVAMFYGD------IKVQLIIDTHYHDWSISEF------MVSRNCESRIMRHFHFTTWPDFGVPE 1498
            :..|.:.:      :|.:......:.|.|.::.      :....|:...:.|:|:..|||.|||.
 Worm   110 KDTMSFKEKGQKVTVKFESSKAIKFRDNSAAKVTKTVLTVEGAGCDKLKVNHYHWIDWPDRGVPT 174

  Fly  1499 PPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYV-DIFGIVFAMRK 1562
            ...:::..:...|...|    ||.||||||:||:|:.:.|:.::..:.....: |...|:..:|:
 Worm   175 ADNAILELLEKARVSKG----PIAVHCSAGIGRTGSVVMLEYVMDQLLAGQIIEDTDKIIQKIRE 235

  Fly  1563 ERVFMVQTEQQYVCIHQCLLAVLEGKEHLLADS 1595
            :|...|||:.||:.:||.::...| |..||.::
 Worm   236 QRNNSVQTDHQYLFVHQVMMNFFE-KRGLLDEA 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 69/238 (29%)
K07F5.8NP_501766.1 Y_phosphatase 19..256 CDD:459674 74/261 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.