DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and C17H12.3

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_001379692.1 Gene:C17H12.3 / 177443 WormBaseID:WBGene00015929 Length:374 Species:Caenorhabditis elegans


Alignment Length:282 Identity:90/282 - (31%)
Similarity:143/282 - (50%) Gaps:47/282 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1328 RFSEEFEEL-KHVGRD------QACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDD------ 1379
            :..:||.:: |:...|      .|...||:  |..|||:.::           |..|.:      
 Worm    77 KLRDEFRQMAKYTRPDMTQNAFNANQSANI--NETKNRYADV-----------PCQDQNIVLVAK 128

  Fly  1380 ---GSDYINANYMPGHNSP-REFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQ 1440
               .|||::||::.....| :.||.|||||..|.::||.|..:.....||||.:..|.|:.||.|
 Worm   129 PPAPSDYVHANFVGCPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQ 193

  Fly  1441 YWPVDRVAM-----FYGDIKVQLIIDTHYHD----WSISEFMVSRNCESRIMRHFHFTTWPDFGV 1496
            |||   :||     ..|.|.|:.:..|...|    ..|:...||...:...:||.|::.|||.||
 Worm   194 YWP---LAMGEKKEVKGGIVVENVSGTKPMDRDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGV 255

  Fly  1497 PEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYV-DIFGIVFAM 1560
            |....:.:..:.|.|   |:.: ||:||||||:||:||.:|::.||:.|.::... .:..:|.::
 Worm   256 PPCKLTSLELLSAVR---GSRV-PIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMPDLVKSL 316

  Fly  1561 RKERVFMVQTEQQYVCIHQCLL 1582
            |.:|.:.:||:.||:.||:.:|
 Worm   317 RDQRAYSIQTDMQYLYIHRVML 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 78/240 (33%)
C17H12.3NP_001379692.1 PTPc 77..339 CDD:214550 90/282 (32%)
Blue background indicates that the domain is not in the aligned region.

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