DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ptpn-22

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_500128.2 Gene:ptpn-22 / 176981 WormBaseID:WBGene00021507 Length:469 Species:Caenorhabditis elegans


Alignment Length:421 Identity:115/421 - (27%)
Similarity:191/421 - (45%) Gaps:76/421 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1291 MQDELAALPEGYITPNRPVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRP 1355
            :::|.|..|:.|:           ...|:|.......|...|:.        ..|:.|  |.:..
 Worm    85 LKEEEAYTPQDYL-----------RRFYQIRVEQEKLRMEAEYR--------SECAVA--PQHYA 128

  Fly  1356 KNRFTNILPYDHSRFKLQPVDDDDGSDYINAN--YMPGHNSPREFIVTQGPLHSTREEFWRMCWE 1418
            :||:.:|||||.:|.::|. |.::...|:||:  .:||..:  |||..|.||.:|.:|:|:|..|
 Worm   129 RNRYRDILPYDKNRVEIQK-DSENPEGYMNASLIQLPGGKT--EFIAAQAPLPATLDEWWKMIDE 190

  Fly  1419 SNSRAIVMLTRCFEKGREKCDQYWPVDRV--AMFYGDIKVQLIIDTHYHDWSISEFMVSRNC--- 1478
            .....:|:|.:..|..:.||::||| ::|  :..:||.::.|..:..:.|   .|:::  .|   
 Worm   191 HRVSLVVILCKLVELNKIKCERYWP-EQVGESELFGDYEITLEEEKLFDD---DEYLM--RCLKM 249

  Fly  1479 ------ESRIMRHFHFTTWPDFGVPEPPQSLVRFV----RAFRDVIGTDMRPIIVHCSAGVGRSG 1533
                  |.|.:...|:..|||.|.|...:.|:..:    ....:|...|..||:|||||||||:|
 Worm   250 ENQTTGECRKVHQLHYREWPDHGCPSGEKQLLNMIDLMENIHEEVSPQDSSPILVHCSAGVGRTG 314

  Fly  1534 TFIALDRILQH-----IHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGKEHLLA 1593
            |.||::.|.:.     :|.   :||||:|..:||:|..||||:.|:..:|:|:.:..  :.||  
 Worm   315 TIIAINFIREQMKAETLHS---IDIFGLVMTLRKQRASMVQTQDQFQFVHRCIASYC--RRHL-- 372

  Fly  1594 DSLELHANDGYEVTKIYLERQPQTKMGTLPIRASLAMAEKLDADLMTNKDEDEDQEQQQQQQLQL 1658
                     |. :.:..|:..|......||:.:|.::.........|....|:........||  
 Worm   373 ---------GI-IEEPKLDLAPPVATADLPVGSSGSVRLIAPPTPTTGPSTDQTATIANYNQL-- 425

  Fly  1659 ATEVKPKGSNDDEED---EEDDDDDDDDQQP 1686
              ......||..:||   ||.....|..::|
 Worm   426 --HHHQSSSNHMDEDTSTEEAASVPDFPEEP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 81/242 (33%)
ptpn-22NP_500128.2 PTPc 102..365 CDD:214550 90/284 (32%)
Blue background indicates that the domain is not in the aligned region.

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