Sequence 1: | NP_001162669.1 | Gene: | Ptp4E / 31425 | FlyBaseID: | FBgn0004368 | Length: | 1767 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_500128.2 | Gene: | ptpn-22 / 176981 | WormBaseID: | WBGene00021507 | Length: | 469 | Species: | Caenorhabditis elegans |
Alignment Length: | 421 | Identity: | 115/421 - (27%) |
---|---|---|---|
Similarity: | 191/421 - (45%) | Gaps: | 76/421 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 1291 MQDELAALPEGYITPNRPVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRP 1355
Fly 1356 KNRFTNILPYDHSRFKLQPVDDDDGSDYINAN--YMPGHNSPREFIVTQGPLHSTREEFWRMCWE 1418
Fly 1419 SNSRAIVMLTRCFEKGREKCDQYWPVDRV--AMFYGDIKVQLIIDTHYHDWSISEFMVSRNC--- 1478
Fly 1479 ------ESRIMRHFHFTTWPDFGVPEPPQSLVRFV----RAFRDVIGTDMRPIIVHCSAGVGRSG 1533
Fly 1534 TFIALDRILQH-----IHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGKEHLLA 1593
Fly 1594 DSLELHANDGYEVTKIYLERQPQTKMGTLPIRASLAMAEKLDADLMTNKDEDEDQEQQQQQQLQL 1658
Fly 1659 ATEVKPKGSNDDEED---EEDDDDDDDDQQP 1686 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptp4E | NP_001162669.1 | FN3 | 151..242 | CDD:238020 | |
fn3 | 247..328 | CDD:278470 | |||
fn3 | 343..417 | CDD:278470 | |||
fn3 | 443..525 | CDD:278470 | |||
FN3 | 548..611 | CDD:238020 | |||
FN3 | 620..706 | CDD:238020 | |||
fn3 | 708..796 | CDD:278470 | |||
fn3 | 824..886 | CDD:278470 | |||
fn3 | 902..978 | CDD:278470 | |||
fn3 | 1013..1092 | CDD:278470 | |||
UP_III_II | 1106..>1248 | CDD:297589 | |||
PTPc | 1329..1582 | CDD:214550 | 88/274 (32%) | ||
PTPc | 1355..1582 | CDD:238006 | 84/248 (34%) | ||
ptpn-22 | NP_500128.2 | PTPc | 102..365 | CDD:214550 | 90/284 (32%) |
PTPc | 129..365 | CDD:238006 | 84/247 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001181 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |