DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and C18E9.7

DIOPT Version :9

Sequence 1:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_001348641.1 Gene:C18E9.7 / 174432 WormBaseID:WBGene00007687 Length:893 Species:Caenorhabditis elegans


Alignment Length:1257 Identity:244/1257 - (19%)
Similarity:404/1257 - (32%) Gaps:509/1257 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VWLVVGILTIFLAQHANAADLVINVPNASSNANAFYRIDYSPPFGFPEP-------------NTT 105
            ::|::.:|..:.:..::::.||....:|.......|.|:||||.|:|..             |.|
 Worm     1 MFLLIFLLASYNSIASSSSILVDFTSHAIQPTPQAYIIEYSPPVGYPPSGSAVEGTTFYSLINGT 65

  Fly   106 IPASDIGKDIKFSRALPGTEYNFWLYYTNSTHREQLTWTVNITTAPDPPANLSVQLRSSKSAFIT 170
            |.|:|....|. :..:.||..|.          .:||    :.::||.|...|:: .:...|.|:
 Worm    66 ISATDYTVSIS-AILMDGTRQNI----------GELT----VFSSPDAPTLDSIE-TTEHEATIS 114

  Fly   171 WRPPGSGRYSGFRIRVLGLTDLPFERSYSLE---------GNETLQLSAKELTPGGSYQVQAYSV 226
            :.|| .|:            ::.:...|..|         ..:|..:..:.|..|.:::::..||
 Worm   115 YFPP-QGQ------------NITYHMEYYPEEHKEYTNPIDTKTALVKLRGLDSGTTFRLRIRSV 166

  Fly   227 YQGKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPPFPAGIYTHYRVSITPDDAIQSVLY 291
            |||..|..:....|||:..                            .:|..|.:.:        
 Worm   167 YQGVLSQEFIDTTFTTQGT----------------------------ANYDYSSSAE-------- 195

  Fly   292 VEREGEPPGPAQAAFKGLVPGREYNISVQT------------VSEDETSSVPTTA--RYLTVPER 342
                       |.:.|.|.|  .:||.:||            |.||.|.:.|..|  ...|.|.|
 Worm   196 -----------QYSVKTLPP--NFNIGLQTTTEMTSYEYSREVEEDPTITTPLVAVTTTFTPPVR 247

  Fly   343 ---VLNVTFDEAYTTSSSFRVRWEPPRTYSEFDAYQVML----STSRR-IFNVPRAA-----NGD 394
               :::.|..|:.|||:.      |..|.:|....:|.|    :|.|| ....|:|:     :||
 Worm   248 ETVMVSTTTAESSTTSTI------PEVTETEVSTTEVTLQKETTTPRRPTTTKPKASPMEVNSGD 306

  Fly   395 ----------SVYFDYPDIL-EPGRTYEVVVKTIADNVNSWPASGEVTLRPRPVRSLGGFLDDRS 448
                      :|..|.|::: |.|...|:           |                   |.|.:
 Worm   307 LGEDHPSENTNVLVDLPEMIKEYGEPSEI-----------W-------------------LSDEN 341

  Fly   449 NALHISWEPAETGRQDSYRISYHEQTNASEVPAPFPVAAESQITTNL---TEYTLDSLLAGRRYL 510
            ..|.:.||..|....:::.::|...|.:.  |..|.:|...: ..|:   .|:|||.    |.:.
 Worm   342 EMLRLDWEAPENANCEAFFVNYTILTLSR--PRSFSLATSDE-NANIKMFPEHTLDI----RVFC 399

  Fly   511 IAVQALSKGVASNASDITRYTRPAAPLIQELRSIDQGLMLSWRSDVNSRQDRYEVHYQRNGTREE 575
            :...||||                                :|..                     
 Worm   400 MIAGALSK--------------------------------TWWG--------------------- 411

  Fly   576 RTMATNETSLTIHYLHPGSGYEVKVHAISHGVRSEPHSYFQAVFPKPPQNLTLQTVHTN-----L 635
                                     |.|:|..:           ||..:|:.:..|:|:     .
 Worm   412 -------------------------HRIAHLSK-----------PKQLENVRVTEVNTDEFYVAS 440

  Fly   636 VVLHWQAPEGSDFSEYVVRYRTDASPWQRISGLHENEARIKDMHYGERYLVQVNTVSFGVESPHP 700
            :.|.|..|...||..|.:                                    .:|||:.....
 Worm   441 IKLAWDWPVYHDFKSYKI------------------------------------VISFGIGRAES 469

  Fly   701 LELNVTMPPQPVSNVVPLVDSRNLTLEWPRPDGHVDFYTLKWWPTDEEDRVEFKNVTQLEDLSSP 765
            .|:.||                                          ::.||            
 Worm   470 KEMEVT------------------------------------------NKEEF------------ 480

  Fly   766 SVRIPIEDLSPGRQYRFEVQASSN--GIRSGTTHLSTRTMPLIQSDVFIANAGHEQGQ--DETIT 826
               :.::.|.|...|...::.:|.  .:.|.||.|...|.|:|.|.|:       .||  ..:|.
 Worm   481 ---VLLDKLDPSNSYSISIRNASTELSLTSKTTQLEQVTAPIISSTVY-------PGQISSNSIN 535

  Fly   827 LSYTPTPADSTRFDIYRFSMGDPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVSGGVASLP 891
            :::..:..:..|||.|..:.........:|:..:.|:..:|:.|.|||.|..:|:||..||.|.|
 Worm   536 INFGDSDPEQGRFDYYLLTFSGNNKNISKKVEMEHEKSFTFTKLIPGKTYQFSVYTVYKGVRSRP 600

  Fly   892 VQRLYRLHPLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADEEAPQLLQNVTKNTEITL 956
            |......:||.::.|..: |....:.|:|        |.|                         
 Worm   601 VTADITTYPLKVNQLFPV-VGKDYVVLYW--------DIE------------------------- 631

  Fly   957 QGLRPYHNYTFTVVVRSGSIQGTDFADVSVSTLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPG 1021
                                   :|||                                ||.:  
 Worm   632 -----------------------NFAD--------------------------------SDCR-- 639

  Fly  1022 EVTFEWSLEPAEQHGPIDYFRITCQNADDAADVSSYEFPVNATQGKIDGLVPGNHYIFRIQAKSA 1086
                               ||:: .|||:...| |.|.. .|::.:...|....:|.|.|.....
 Worm   640 -------------------FRLS-YNADNIPTV-SVELK-GASRHRFSALKAEVYYTFTITVIMG 682

  Fly  1087 LGYGAEREHIQTMPILAPPVPEPSVTPLEVSRTSSTIEISFRQ--GYFSNAHGMVRSYTIIIAED 1149
            ||..|.....:.:.:   .:|:..::|....:.|..:.:.|..  ..||..:|...::.:|:::|
 Worm   683 LGQAAAESESEMITV---AIPKGRLSPSIHRQGSRELVVGFDNDLSVFSLLNGSPDNFAVIVSDD 744

  Fly  1150 VGKNASGLEMPSWQDVQAYTVWLPYQAI-EPYNPFLTSNGSRKSSLEAEHFTIGTANCDKHQAG- 1212
            ...|....|:.||.:|:...||..|:|. ..:||| .|...|:::     ||:||.:|.|.... 
 Worm   745 TDLNDDNYELKSWFEVKDEEVWGSYRASPSTWNPF-DSERVRRAA-----FTVGTDDCVKRNLDE 803

  Fly  1213 -YCNGPLRAGTTYRIKIRAFTD 1233
             ||||.|||||.||:|||.:||
 Worm   804 PYCNGILRAGTDYRVKIRMYTD 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020 21/99 (21%)
fn3 247..328 CDD:278470 13/92 (14%)
fn3 343..417 CDD:278470 23/94 (24%)
fn3 443..525 CDD:278470 21/84 (25%)
FN3 548..611 CDD:238020 4/62 (6%)
FN3 620..706 CDD:238020 15/90 (17%)
fn3 708..796 CDD:278470 7/89 (8%)
fn3 824..886 CDD:278470 16/61 (26%)
fn3 902..978 CDD:278470 6/75 (8%)
fn3 1013..1092 CDD:278470 17/78 (22%)
UP_III_II 1106..>1248 CDD:297589 45/133 (34%)
PTPc 1329..1582 CDD:214550
PTPc 1355..1582 CDD:238006
C18E9.7NP_001348641.1 FN3 96..182 CDD:238020 21/99 (21%)
FN3 424..497 CDD:214495 20/165 (12%)
FN3 529..607 CDD:238020 21/77 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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