DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and C18E9.7

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_001348641.1 Gene:C18E9.7 / 174432 WormBaseID:WBGene00007687 Length:893 Species:Caenorhabditis elegans


Alignment Length:1257 Identity:244/1257 - (19%)
Similarity:404/1257 - (32%) Gaps:509/1257 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VWLVVGILTIFLAQHANAADLVINVPNASSNANAFYRIDYSPPFGFPEP-------------NTT 105
            ::|::.:|..:.:..::::.||....:|.......|.|:||||.|:|..             |.|
 Worm     1 MFLLIFLLASYNSIASSSSILVDFTSHAIQPTPQAYIIEYSPPVGYPPSGSAVEGTTFYSLINGT 65

  Fly   106 IPASDIGKDIKFSRALPGTEYNFWLYYTNSTHREQLTWTVNITTAPDPPANLSVQLRSSKSAFIT 170
            |.|:|....|. :..:.||..|.          .:||    :.::||.|...|:: .:...|.|:
 Worm    66 ISATDYTVSIS-AILMDGTRQNI----------GELT----VFSSPDAPTLDSIE-TTEHEATIS 114

  Fly   171 WRPPGSGRYSGFRIRVLGLTDLPFERSYSLE---------GNETLQLSAKELTPGGSYQVQAYSV 226
            :.|| .|:            ::.:...|..|         ..:|..:..:.|..|.:::::..||
 Worm   115 YFPP-QGQ------------NITYHMEYYPEEHKEYTNPIDTKTALVKLRGLDSGTTFRLRIRSV 166

  Fly   227 YQGKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPPFPAGIYTHYRVSITPDDAIQSVLY 291
            |||..|..:....|||:..                            .:|..|.:.:        
 Worm   167 YQGVLSQEFIDTTFTTQGT----------------------------ANYDYSSSAE-------- 195

  Fly   292 VEREGEPPGPAQAAFKGLVPGREYNISVQT------------VSEDETSSVPTTA--RYLTVPER 342
                       |.:.|.|.|  .:||.:||            |.||.|.:.|..|  ...|.|.|
 Worm   196 -----------QYSVKTLPP--NFNIGLQTTTEMTSYEYSREVEEDPTITTPLVAVTTTFTPPVR 247

  Fly   343 ---VLNVTFDEAYTTSSSFRVRWEPPRTYSEFDAYQVML----STSRR-IFNVPRAA-----NGD 394
               :::.|..|:.|||:.      |..|.:|....:|.|    :|.|| ....|:|:     :||
 Worm   248 ETVMVSTTTAESSTTSTI------PEVTETEVSTTEVTLQKETTTPRRPTTTKPKASPMEVNSGD 306

  Fly   395 ----------SVYFDYPDIL-EPGRTYEVVVKTIADNVNSWPASGEVTLRPRPVRSLGGFLDDRS 448
                      :|..|.|::: |.|...|:           |                   |.|.:
 Worm   307 LGEDHPSENTNVLVDLPEMIKEYGEPSEI-----------W-------------------LSDEN 341

  Fly   449 NALHISWEPAETGRQDSYRISYHEQTNASEVPAPFPVAAESQITTNL---TEYTLDSLLAGRRYL 510
            ..|.:.||..|....:::.::|...|.:.  |..|.:|...: ..|:   .|:|||.    |.:.
 Worm   342 EMLRLDWEAPENANCEAFFVNYTILTLSR--PRSFSLATSDE-NANIKMFPEHTLDI----RVFC 399

  Fly   511 IAVQALSKGVASNASDITRYTRPAAPLIQELRSIDQGLMLSWRSDVNSRQDRYEVHYQRNGTREE 575
            :...||||                                :|..                     
 Worm   400 MIAGALSK--------------------------------TWWG--------------------- 411

  Fly   576 RTMATNETSLTIHYLHPGSGYEVKVHAISHGVRSEPHSYFQAVFPKPPQNLTLQTVHTN-----L 635
                                     |.|:|..:           ||..:|:.:..|:|:     .
 Worm   412 -------------------------HRIAHLSK-----------PKQLENVRVTEVNTDEFYVAS 440

  Fly   636 VVLHWQAPEGSDFSEYVVRYRTDASPWQRISGLHENEARIKDMHYGERYLVQVNTVSFGVESPHP 700
            :.|.|..|...||..|.:                                    .:|||:.....
 Worm   441 IKLAWDWPVYHDFKSYKI------------------------------------VISFGIGRAES 469

  Fly   701 LELNVTMPPQPVSNVVPLVDSRNLTLEWPRPDGHVDFYTLKWWPTDEEDRVEFKNVTQLEDLSSP 765
            .|:.||                                          ::.||            
 Worm   470 KEMEVT------------------------------------------NKEEF------------ 480

  Fly   766 SVRIPIEDLSPGRQYRFEVQASSN--GIRSGTTHLSTRTMPLIQSDVFIANAGHEQGQ--DETIT 826
               :.::.|.|...|...::.:|.  .:.|.||.|...|.|:|.|.|:       .||  ..:|.
 Worm   481 ---VLLDKLDPSNSYSISIRNASTELSLTSKTTQLEQVTAPIISSTVY-------PGQISSNSIN 535

  Fly   827 LSYTPTPADSTRFDIYRFSMGDPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVSGGVASLP 891
            :::..:..:..|||.|..:.........:|:..:.|:..:|:.|.|||.|..:|:||..||.|.|
 Worm   536 INFGDSDPEQGRFDYYLLTFSGNNKNISKKVEMEHEKSFTFTKLIPGKTYQFSVYTVYKGVRSRP 600

  Fly   892 VQRLYRLHPLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADEEAPQLLQNVTKNTEITL 956
            |......:||.::.|..: |....:.|:|        |.|                         
 Worm   601 VTADITTYPLKVNQLFPV-VGKDYVVLYW--------DIE------------------------- 631

  Fly   957 QGLRPYHNYTFTVVVRSGSIQGTDFADVSVSTLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPG 1021
                                   :|||                                ||.:  
 Worm   632 -----------------------NFAD--------------------------------SDCR-- 639

  Fly  1022 EVTFEWSLEPAEQHGPIDYFRITCQNADDAADVSSYEFPVNATQGKIDGLVPGNHYIFRIQAKSA 1086
                               ||:: .|||:...| |.|.. .|::.:...|....:|.|.|.....
 Worm   640 -------------------FRLS-YNADNIPTV-SVELK-GASRHRFSALKAEVYYTFTITVIMG 682

  Fly  1087 LGYGAEREHIQTMPILAPPVPEPSVTPLEVSRTSSTIEISFRQ--GYFSNAHGMVRSYTIIIAED 1149
            ||..|.....:.:.:   .:|:..::|....:.|..:.:.|..  ..||..:|...::.:|:::|
 Worm   683 LGQAAAESESEMITV---AIPKGRLSPSIHRQGSRELVVGFDNDLSVFSLLNGSPDNFAVIVSDD 744

  Fly  1150 VGKNASGLEMPSWQDVQAYTVWLPYQAI-EPYNPFLTSNGSRKSSLEAEHFTIGTANCDKHQAG- 1212
            ...|....|:.||.:|:...||..|:|. ..:||| .|...|:::     ||:||.:|.|.... 
 Worm   745 TDLNDDNYELKSWFEVKDEEVWGSYRASPSTWNPF-DSERVRRAA-----FTVGTDDCVKRNLDE 803

  Fly  1213 -YCNGPLRAGTTYRIKIRAFTD 1233
             ||||.|||||.||:|||.:||
 Worm   804 PYCNGILRAGTDYRVKIRMYTD 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628 54/273 (20%)
fn3 247..328 CDD:394996 13/92 (14%)
FN3 319..>749 CDD:442628 77/475 (16%)
fn3 708..796 CDD:394996 7/89 (8%)
fn3 902..978 CDD:394996 6/75 (8%)
fn3 1013..1092 CDD:394996 17/78 (22%)
PTP_tm 1127..1247 CDD:465889 42/112 (38%)
R3-PTPc 1358..1579 CDD:350396
C18E9.7NP_001348641.1 FN3 96..182 CDD:238020 21/99 (21%)
FN3 424..497 CDD:214495 20/165 (12%)
FN3 529..607 CDD:238020 21/77 (27%)
PTP_tm 725..841 CDD:465889 41/107 (38%)
Blue background indicates that the domain is not in the aligned region.

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