DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and F55F8.7

DIOPT Version :10

Sequence 1:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:NP_491657.2 Gene:F55F8.7 / 172228 WormBaseID:WBGene00018895 Length:491 Species:Caenorhabditis elegans


Alignment Length:403 Identity:101/403 - (25%)
Similarity:164/403 - (40%) Gaps:107/403 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1278 RCQLIRRASKLARMQDELAALPEGYITPNRPVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRD 1342
            :||.|   |||  .||::    :||:.||                                    
 Worm   176 KCQAI---SKL--HQDKI----KGYMPPN------------------------------------ 195

  Fly  1343 QACSFANLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINANY--MPGHNSPREFIVTQGPL 1405
              |::.....|...||:.::...:.:|..|:..|    .|||:|::  |||.:. ..:|.|||||
 Worm   196 --CTYTAYEANPDLNRYADVRCIEETRVVLKNHD----RDYIHASWMRMPGKDQ-STYITTQGPL 253

  Fly  1406 HSTREEFWRMCWESNSRAIVMLTRCFEKGREKCDQYWP--VDRVAMFYGDIKVQLIIDTHYHDWS 1468
            ..|..:||.|.::.....::||...||.|.|||..|:|  :..|..| |..::.|   |...:.:
 Worm   254 PETLSDFWHMIYQEKIAYVLMLCTLFEGGVEKCALYYPEKLGEVVKF-GKYEITL---TECKEEA 314

  Fly  1469 ISEFMVS---------RNCESRIMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVIGTDMRPIIVH 1524
            |:..:::         ...|...|.|.....|||...||..:.::...:..:.| ....:||.||
 Worm   315 IAGTILNSLTVINTEDATSEPLYMNHVQVPWWPDQLAPEDARPMIELYKWVKKV-NPKEKPICVH 378

  Fly  1525 CSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGKE 1589
            |||||||:.||:.:|.....|.::..:::..||..||..|...||:..|::.::..|:      |
 Worm   379 CSAGVGRTATFVGIDYATIRIMENPNIEMLDIVREMRAMRFQAVQSHMQFLFLYVVLM------E 437

  Fly  1590 HLLADSLELHANDGYEVTKIYLER--QPQTKMGTLPIRASLAMAEKLDADLMTNKDEDEDQEQQQ 1652
            :.:.:.:              :||  |..|.|......|...:|::               ..|.
 Worm   438 YFIGEGV--------------VERTGQIDTFMTQYKKHAQKKLAKR---------------AVQN 473

  Fly  1653 QQQLQLATEVKPK 1665
            ||..::|||.|.|
 Worm   474 QQGEKVATEGKEK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628
fn3 708..796 CDD:394996
fn3 902..978 CDD:394996
fn3 1013..1092 CDD:394996
PTP_tm 1127..1247 CDD:465889
R3-PTPc 1358..1579 CDD:350396 69/233 (30%)
F55F8.7NP_491657.2 PTPc 193..437 CDD:214550 75/297 (25%)
Blue background indicates that the domain is not in the aligned region.

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