DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp4E and LOC101733293

DIOPT Version :9

Sequence 1:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_031757761.1 Gene:LOC101733293 / 101733293 -ID:- Length:7742 Species:Xenopus tropicalis


Alignment Length:1362 Identity:299/1362 - (21%)
Similarity:512/1362 - (37%) Gaps:348/1362 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 YQNSQQQQKHFVWLVVGILTIFLAQHANAADLVINVPNASSNANAFYRID--YSPPFG------- 98
            ||.|.        ::.|..::.|.....:....|.|.|.|:     |.:|  :|||.|       
 Frog  3897 YQGSD--------MLYGFGSLLLLHTRPSVVSNIQVSNVST-----YSVDLRWSPPTGQHDYYRI 3948

  Fly    99 ------FPEPNTTIPASDIGKDIKFSRALPGTEYNFWLYYTNSTHREQLTWTV---NITTAPD-- 152
                  |.:.|||:      :.|......|||.|.|.:            |.|   ||...|:  
 Frog  3949 EVIGYVFQQMNTTV------ESISIQNLTPGTNYTFRI------------WAVVGDNILGDPNES 3995

  Fly   153 ----PPAN---LSVQLRSSKSAFITWRPPGSGRYSGFRIRVLGLTDLPFERSYSLEGNETLQLSA 210
                .|||   |::...|:.|.:::|... .|..:.:.:.|.|  |||  :.:::| :|::.:| 
 Frog  3996 SSFTKPANINILNINRISNSSLYVSWHLT-EGSTTSYLVEVTG--DLP--QQFNVE-SESINIS- 4053

  Fly   211 KELTPGGSYQVQAYSV---YQGKES-------------------------------VAYTSRNFT 241
             .||.|..|.|...:|   .||.:|                               ::||. |.|
 Frog  4054 -NLTTGNQYTVAISAVAGSQQGGKSEFSVLLSDTLSCTNISTNSMTLLWDTVSEPNISYTI-NVT 4116

  Fly   242 TKP-----NTPGKFI-----------------------------------------VWFRNET-- 258
            ..|     |:..:|:                                         |.|.|||  
 Frog  4117 GSPPWNWSNSTSEFMLQNLIPGNLYIIQLSAYQENNLLYGYGGQISVYTRPEEVKNVTFGNETIS 4181

  Fly   259 TLLVLWQPPFPAGIYTHYRVSITPDDAIQSVLYVEREGEPPGPAQAAFKGLVPGREYNISVQTVS 323
            ::.|.|.||.  |.|:.|:|.|   :.:|::         .......|:.|..|.:|.|.:..|:
 Frog  4182 SIDVAWLPPI--GNYSFYKVVI---NEVQNM---------TNSTTWTFQELTAGTQYRIQISAVA 4232

  Fly   324 -EDETSSVPTTARYLTVPERVLNVTFDEAYTTSSSFRVRWEPPRTYSEFDAYQVMLSTSRRIFNV 387
             ||.|.|.....:| |.|:.:.|::.....|||.|  :.|..|:....|  |.:      :||..
 Frog  4233 GEDVTGSAVLNWQY-TRPDVIQNLSISSLNTTSVS--LSWLKPQGGKNF--YYI------KIFGT 4286

  Fly   388 PRAANGDSVYFDYPDILEPGRTYEVVVKTIADNVNSWPASGEVTLRPRPVRSLGGFLDD-RSNAL 451
            .......:.....|. |.||..|.::|..:|.::...|.:..||..|..:.||  .:|: .:.::
 Frog  4287 DMIITSATESCTIPG-LTPGSQYTLLVYAVAGDITGNPVNVTVTTNPSAIESL--IIDNVTTTSV 4348

  Fly   452 HISWEPAETGRQDSYRISYHEQTNASEVPAPFPVAAESQITTNLTEYTLDSLLAGRRYLIAVQAL 516
            .:|| |...|...||.|..        |..|     ..::..|.....:|.|:.|..|...|.|.
 Frog  4349 SLSW-PIPLGNISSYIIQV--------VGTP-----SKELIVNTNSAVVDQLIPGNYYTFMVFAT 4399

  Fly   517 SKGVASNASDI--TRYTRPAAPLIQELRSIDQ----GLMLSW---RSDVNSRQDRYEVHYQRNGT 572
            :..:  |.:.|  :.:|.|:|  |:.| .||.    .:.|||   ..:::|    |.:  |..||
 Frog  4400 AGNM--NGTKILNSTFTDPSA--IESL-IIDNVTTTSVSLSWPIPLGNISS----YII--QVLGT 4453

  Fly   573 REERTMATNETSLTIHYLHPGSGYEVKVHAISHGVRSEP--HSYFQAVFPKPPQNLTLQTVHTNL 635
            ..:..:....:|| :..|.||:.|...|.|.:..:....  :|.|.|  |....:||:..:.|..
 Frog  4454 PSKELIVNTNSSL-VDQLIPGNYYTFMVFATAGNMNGTKILNSTFTA--PSAITSLTIDNITTTS 4515

  Fly   636 VVLHWQAPEGSDFSEYVVRYRTDASPWQRISGLHENEARIKDMHYGERYLVQVNTVSFGVESPHP 700
            |.|.|..|.| :.|.|:::..  .:|...:. ::.|.:.:..:..|..|...|...:..:.....
 Frog  4516 VSLSWPIPLG-NISSYIIQVL--GTPSNELI-VNTNSSLVDQLIPGNYYTFMVFATAGNMNGTKT 4576

  Fly   701 LELNVTMPPQPVSNVVPLVDSRNLTLEWPRPDGHVDFYTLKWWPTDEEDRVEFKNVTQLEDLSSP 765
            :....|:|....|.::..|.:.:::|.|..|.|::..|.::...|..::.:...|         .
 Frog  4577 VNSTFTVPSAIASLIIDNVTTTSVSLSWSTPLGNISSYIIQVLGTPSKELIVNTN---------S 4632

  Fly   766 SVRIPIEDLSPGRQYRFEVQASSNGIRSGTTHLSTRTMPLIQSDVFIANAGHEQGQDETITLSYT 830
            ||   ::.|.||..|.|.|.|::..:.|..|..||.|:|...:.:.|.|.     ...:::||: 
 Frog  4633 SV---VDQLIPGNDYTFTVFATAGNMNSTKTLNSTFTVPSAITSLTIDNI-----TTTSVSLSW- 4688

  Fly   831 PTPADSTRFDIYRFSMGDPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVSGGVASLPVQRL 895
            |.|..:....|.:. :|.|:    .:|..:|...| ...|.||..|...|:..:|.:........
 Frog  4689 PIPLGNISSYIIQV-LGTPS----NELIVNTNSSL-VDQLIPGNYYTFIVFATAGNMNGTKTVNS 4747

  Fly   896 YRLHPLPISDLKAIQVAAREITLHWTAPAGEYTDFELQYLSADEEAPQLLQNVTKNTEITLQGLR 960
            ....|..|:.|....|....::|.|:.|.|..:.:.:|.|....:  :|:.|.  |:.:..| |.
 Frog  4748 TFTVPSAIASLIMDNVTTTSVSLSWSTPLGNISSYIIQVLGTPSK--ELIVNT--NSSVVDQ-LI 4807

  Fly   961 PYHNYTFTVVVRSGSIQGTDFADVSVSTLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPGEVTF 1025
            |.::|||||...:|:              |.|:..:::::    ..|..::.....:|....|:.
 Frog  4808 PGNDYTFTVFATAGN--------------MNSTKTLNSTF----TDPSAIESLTIDNVTTASVSL 4854

  Fly  1026 EWSLEPAEQHGPIDYFRITCQNADDAADVSSY----------EFPVNATQGKIDGLVPGNHYIFR 1080
            .|::       |:             .::|||          |..||.....:|.|:|||:|.|.
 Frog  4855 SWAI-------PL-------------GNISSYIIQVLGTPSKELIVNTNSAVVDQLIPGNYYTFM 4899

  Fly  1081 IQAKSALGYGAEREHIQTMPILAPPVPEPSVTPLEVSR-TSSTIEISFRQGYFSNAHGMVRSYTI 1144
            :.|.:....|       |..:::......::|.|.:.. |:|::.:|     :....|.:.||.|
 Frog  4900 VFATAGNLNG-------TKTLISTFTAPSAITSLTIDNITTSSVSLS-----WPIPLGNISSYII 4952

  Fly  1145 IIAEDVGKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLEAEHFTIGTANCDKH 1209
            .:          |..||.:.:......|..|.| |.|.:.              |.:.|.     
 Frog  4953 QV----------LGTPSNELIVNTNSSLVNQLI-PGNYYT--------------FIVFTT----- 4987

  Fly  1210 QAGYCNGPLRAGTTYRI--KIRAFTDEDKFTDTV---YSSPITTERSDTVIVAATVSAVLLV 1266
             ||..||.....:|:.:  .|.:...::..|.:|   :|:|:....|..:.|..|.|..|:|
 Frog  4988 -AGNMNGTKTVNSTFTVPSAIASLIIDNVTTTSVSLSWSTPLGNISSYIIQVLGTPSKELIV 5048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020 29/133 (22%)
fn3 247..328 CDD:278470 24/124 (19%)
fn3 343..417 CDD:278470 17/73 (23%)
fn3 443..525 CDD:278470 18/82 (22%)
FN3 548..611 CDD:238020 16/65 (25%)
FN3 620..706 CDD:238020 16/85 (19%)
fn3 708..796 CDD:278470 20/87 (23%)
fn3 824..886 CDD:278470 15/61 (25%)
fn3 902..978 CDD:278470 21/75 (28%)
fn3 1013..1092 CDD:278470 19/88 (22%)
UP_III_II 1106..>1248 CDD:297589 29/147 (20%)
PTPc 1329..1582 CDD:214550
PTPc 1355..1582 CDD:238006
LOC101733293XP_031757761.1 FN3 3..85 CDD:238020
FN3 255..339 CDD:238020
FN3 341..425 CDD:238020
FN3 427..493 CDD:238020
FN3 513..584 CDD:214495
FN3 599..683 CDD:238020
FN3 685..752 CDD:214495
FN3 771..848 CDD:214495
FN3 857..924 CDD:214495
FN3 943..1027 CDD:238020
FN3 1029..1096 CDD:214495
FN3 1201..1268 CDD:214495
FN3 1287..1371 CDD:238020
FN3 1373..1457 CDD:238020
FN3 1545..1612 CDD:214495
FN3 1631..1715 CDD:238020
FN3 1717..1784 CDD:214495
FN3 1803..1880 CDD:214495
FN3 1889..1956 CDD:214495
FN3 1975..2057 CDD:238020
FN3 2227..2311 CDD:238020
FN3 2313..2397 CDD:238020
FN3 2399..2483 CDD:238020
FN3 2485..2552 CDD:214495
FN3 2657..2740 CDD:238020
FN3 2909..2992 CDD:238020
FN3 2993..3066 CDD:238020
FN3 3077..3158 CDD:238020
FN3 3161..3244 CDD:238020
FN3 3329..3402 CDD:238020
FN3 3581..3664 CDD:238020
FN3 3916..3999 CDD:238020 25/105 (24%)
FN3 4087..4148 CDD:419708 7/61 (11%)
fn3 4250..4323 CDD:394996 18/83 (22%)
FN3 4332..4414 CDD:238020 22/99 (22%)
FN3 4416..4498 CDD:238020 23/91 (25%)
FN3 4500..4583 CDD:238020 16/86 (19%)
FN3 4584..4667 CDD:238020 23/94 (24%)
FN3 4668..4751 CDD:238020 19/94 (20%)
FN3 4752..4834 CDD:238020 24/104 (23%)
FN3 4836..4918 CDD:238020 21/108 (19%)
FN3 4920..5003 CDD:238020 24/118 (20%)
FN3 5004..5086 CDD:238020 11/45 (24%)
FN3 5088..5171 CDD:238020
FN3 5172..5255 CDD:238020
FN3 5256..5338 CDD:238020
FN3 5340..5422 CDD:238020
FN3 5424..5507 CDD:238020
FN3 5508..5590 CDD:238020
FN3 5592..5675 CDD:238020
FN3 5676..5759 CDD:238020
FN3 5844..5927 CDD:238020
FN3 5928..6011 CDD:238020
FN3 6012..6095 CDD:238020
FN3 6186..6263 CDD:238020
FN3 6354..6421 CDD:238020
FN3 6438..6515 CDD:238020
FN3 6600..6682 CDD:238020
FN3 6850..6933 CDD:238020
FN3 6934..7018 CDD:238020
FN3 7019..7093 CDD:238020
FN3 7104..7187 CDD:238020
FN3 7188..7272 CDD:238020
FN3 7273..7356 CDD:238020
FN3 7357..7424 CDD:238020
fn3 7527..7599 CDD:394996
FN3 7610..7683 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.