DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp4E and ptprq

DIOPT Version :9

Sequence 1:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster
Sequence 2:XP_031754742.1 Gene:ptprq / 100491367 XenbaseID:XB-GENE-921489 Length:2351 Species:Xenopus tropicalis


Alignment Length:1792 Identity:435/1792 - (24%)
Similarity:688/1792 - (38%) Gaps:505/1792 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 YSPPFGFPEPNTTIPASDI----GKDIKFSR-----ALPGTE-YNFWLY------YTNSTHREQL 141
            :|||.   |||..|...::    ..|: |::     :|..|: |.:.||      :|...|..|.
 Frog   733 WSPPL---EPNGIITHYEVIYTNDTDL-FTQNTALTSLSLTDLYPYTLYSISVRAFTRFGHGNQT 793

  Fly   142 TWTVNI---TTAP-DPPANLSVQLRSSKSAFITWRPP--GSG----------------------- 177
            |..:.:   .||| .||.||:.:..||....|.|:||  .:|                       
 Frog   794 TNVLAVRTSETAPSSPPYNLTYRSISSTEVLIRWQPPLFANGIIQFYNITYWNASLNLTNTSKDP 858

  Fly   178 --------RYSGFRIRVLG------------------LTDLPFERSYSLEGNETLQLSAKE---- 212
                    :||.:::.|.|                  |.|:|   ..:.||.:.:.:|:.:    
 Frog   859 QIVLSDLKKYSQYQVAVSGSTMHGNGNQTSAVLNMTTLEDVP---ESAPEGIKYINISSTDIEVS 920

  Fly   213 ----LTPGGSYQVQAYSVY---------------------------------------QGKESVA 234
                |.|.|:  :..|::|                                       :| |.:.
 Frog   921 FYPPLIPNGN--IMYYTIYITWLNETMEKAMNTTNLIGNITGLKKYTSYILSVSASTIKG-EGIR 982

  Fly   235 YTSRNFTTK---PNTPGKFI-VWFRNETTLLVLWQPPF-PAGIYTHYRVSITPDDAIQSV----L 290
            ...:..||:   |::|.:.: |...:..|:.:.|:||. |.||..:|.|.|..:.:.:::    .
 Frog   983 SAPQIITTEEDSPSSPPRSLKVKQLSGITMELSWEPPLEPNGIILNYNVYIWNEISNKTITVKQT 1047

  Fly   291 YVEREGEPPGPAQAAFKGLVPGREYNISVQTV-----------------SEDETSSVPTTARYLT 338
            :||.|            .|....||...|.|:                 ||...|..|....|..
 Frog  1048 FVELE------------HLETNNEYYAYVTTITRFGDGNIRSDIVTFRTSEGAPSDPPRNVSYKN 1100

  Fly   339 VPERVLNVTFDEAYTTSSSFRVRWEPPR------------------TYS---------------- 369
            :              ||.|..|.|.||.                  |||                
 Frog  1101 I--------------TSDSIMVYWIPPSKPNGIIQYYLVYYSNITDTYSKNLTADEINTDMEGQW 1151

  Fly   370 -------EFDAYQVMLSTSRRIFNVPRAANGDSVYFDYPDILEPGRTYEVVVKTIADNVNSWPAS 427
                   :|..|:..::.|        .:.||            |......:..|.|  ...|.|
 Frog  1152 AIVGGLAKFSTYKFWITAS--------TSFGD------------GNQTSEKIDVITD--EDVPES 1194

  Fly   428 GEVTLRPRPVRSLGGFLDDRSNALHISWEP--AETGRQDSYRIS-YHEQTNASEVPAPFPVAAES 489
            |.|         :....:..|.:..:.|:|  ...|...:|.:. |..|.|.|...:...:    
 Frog  1195 GPV---------IKDCFNQTSASCLLIWDPPLKPNGIIRNYSLELYGPQGNQSLCTSDTFI---- 1246

  Fly   490 QITTNLTEYTLDSLLAGRRYLIAVQALS-KGVA--SNASDITRYTRPAAPLIQELRSI---DQGL 548
             |..:||.||        ::::::.|.: ||:.  :..:..|....|:.| .|.|..|   |...
 Frog  1247 -ILKDLTPYT--------QFIVSIAATTIKGMGPPNQFAFQTDEAEPSMP-PQNLTFINASDNTA 1301

  Fly   549 MLSWRSD--VNSRQDRYEVHYQRNGTREE--RTMATNETSLTIHYLHPGSGYEVKVHA---ISHG 606
            .|.|...  .|.....|......||:..|  :.:...:|...:..|.|.:.|...|.|   :.:|
 Frog  1302 WLHWSPSPKPNGIVLAYSFKIVENGSELEFFQNITGKQTEGQLSALQPFTTYFASVSAFTKVGNG 1366

  Fly   607 VRSEPHSYF--QAVFPKPPQNLTLQTVHTNLVVLHWQAP--EGSDFSEYVVRYRTDASPWQRISG 667
            .:...:..|  :...|...||:.........|::.|..|  :....|.|::....:.|       
 Frog  1367 NQFSNNISFTTKESVPGIVQNIRCTPTSYQSVLIQWDPPSQQNGMISHYIITSNDNIS------- 1424

  Fly   668 LHENEARIKDMHYGERYLVQVNTVSFGVESPHPL------ELNVT-----MPPQPVSNVVPLVDS 721
                |...||..|..|.|:...|.:|.:::.:..      |.|.|     :|..|.|.....|:|
 Frog  1425 ----EVPPKDQVYTLRELLSNTTYTFKIQAVNAAGKGQEQECNATTKSEEVPSAPRSVTFLSVES 1485

  Fly   722 RNLTLEWPRP---DGHVDFY-----TLKWWPTDEEDRVEFKNVTQLEDLSSPSVRI-PIEDLSPG 777
            .:|.:.|.||   :|::..|     .|.|...:.::....:.|..........|.| .|..|...
 Frog  1486 GSLVIRWNRPTNVNGYLMNYKITVQLLSWECNNWDNNKCIETVLDFYSFEDEVVLIKTINGLKTF 1550

  Fly   778 RQYRFEVQASSN---GIRSGTTHLSTRTMPLIQSDVFIANAGHEQGQDETITLSYTPTPADSTRF 839
            |.||.::.||:|   |:.|...|  |:|:|           |...|..:.:|::           
 Frog  1551 RWYRLKISASTNTGYGVPSPWIH--TQTLP-----------GPANGPPQNVTVT----------- 1591

  Fly   840 DIYRFSMGDPTIKDKEKLANDTERKLSFSGLTPGKLYNVTVWTVSGGVASLPVQRLYRLHPLPIS 904
                                .|.:.|:.|            |.                .||.| 
 Frog  1592 --------------------ATSQSLNIS------------WK----------------EPLII- 1607

  Fly   905 DLKAIQVAAREITLHWTAPAGEYTDFELQYLSAD-EEAPQL---LQNVTKNTEITLQGLRPYHNY 965
                            |.|    |.|.:...|.: ||..::   |.|.:|..|:|  ||:|:.||
 Frog  1608 ----------------TGP----TSFMINVSSVNREEYSKVFTKLSNESKTLEVT--GLKPFTNY 1650

  Fly   966 TFTVVVRSGSIQGTDFADVSVSTLMRSSAPISASYQTLTA-PPGKVDYFQ-PSDVQPGEVTFEWS 1028
            :.||...:|.      :|::.:....||..|..:.:.:.| ||..::..: |.||...::||   
 Frog  1651 SVTVTAFTGP------SDLAYTEGKLSSVVIVTTLEAVPADPPTNIEIQKIPHDVTKVQMTF--- 1706

  Fly  1029 LEPAEQHGPIDYFRITCQ--NADDA--ADVSSYEFPVNATQGKIDGLVPGNHYIFRIQAKSALGY 1089
            :.|:|.:|.|.|..:..:  |..|:  .::|..:...|.....||||..|..|..||.|.:..|.
 Frog  1707 IPPSEPNGKIQYQAVVYKEDNPKDSQIRNLSIIKNNNNTITAVIDGLKGGYTYNIRIYAVNGAGA 1771

  Fly  1090 GAEREHIQ-TMPILAPP----VPEPSVTPL-EVSRTSSTIEISFRQGYFSNAHGMVRSYTIIIAE 1148
            |.....:: |..|..||    .|:|...|. .:..|::|..|...:.|||:.:|.::...:|::|
 Frog  1772 GPNATQMKITTDITEPPRPVMQPQPIYNPSGSIRATATTFTIMMPKCYFSDDNGPIKYIQVIVSE 1836

  Fly  1149 DVGKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNG-----SRKSSLEAEHFTIGTANC-- 1206
            ...::...:   ||        |......:| .|:.||:|     ..||.:..|:......:|  
 Frog  1837 VGAQHVGNI---SW--------WHEAYHKKP-KPYFTSDGFPNPLCSKSRISDEYVIGANESCMA 1889

  Fly  1207 -DKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPITT-----ERSDTVIVAATVSAVLL 1265
             |.... :|||||:....|..|.||.....::||:|||..:.|     .::...|:.:....||.
 Frog  1890 LDIKDT-FCNGPLKPRKQYLFKFRATNIRGQYTDSVYSEVVKTLDDGLSQTQVEIILSVTLCVLS 1953

  Fly  1266 VAMVLVVVYCQHRC--------------------------------------QLIRRASKLARMQ 1292
            |.:::..:|...|.                                      :|.|.:|...:.:
 Frog  1954 VILLVGAIYAFARIRQKQKEGGTYSPRDAEIIDTKFKLEQLITVADLELKDERLTRYSSFFFKRK 2018

  Fly  1293 DELAALPEGYITPNRPVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKN 1357
            |........|....:||..|.|.:|...:..:::.:|.|||.||.....|.|.|.|:||.||.||
 Frog  2019 DIYVIQLLSYRKSLKPVSKKGFLQHVEELCTNNNLKFQEEFSELPKFLEDLAVSDADLPWNRSKN 2083

  Fly  1358 RFTNILPYDHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSR 1422
            |||||.||:::|.||.......|||||||:|:.|:..|.|||.|||||..|..:||||.||:.::
 Frog  2084 RFTNIKPYNNNRVKLIADAGVPGSDYINASYVSGYICPNEFIATQGPLAGTVGDFWRMVWETRAK 2148

  Fly  1423 AIVMLTRCFEKGREKCDQYWPVD-RVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNCESRIMRHF 1486
            .|||||:|:||||.:|.||||.| :....:|||.:..:.:....||:..:..|.|:.:..|:|..
 Frog  2149 TIVMLTQCYEKGRIRCHQYWPEDNKPVTVFGDIVITKVAEDVQIDWTTRDLKVERHGDFMIVRQC 2213

  Fly  1487 HFTTWPDFGVPEPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYV 1551
            ::|:||:.||||...||:.||:..|.....:..|.:|||||||||:|.|:|||.::|||:..|:|
 Frog  2214 NYTSWPEHGVPESTASLMHFVKMIRANRPHENTPTVVHCSAGVGRTGVFVALDHLVQHINHHDFV 2278

  Fly  1552 DIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGK 1588
            ||:|:|..:|.||:.|||...||:.:|||::.:|..|
 Frog  2279 DIYGLVAELRSERMCMVQNMAQYIFLHQCVVDLLASK 2315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020 29/189 (15%)
fn3 247..328 CDD:278470 22/103 (21%)
fn3 343..417 CDD:278470 16/114 (14%)
fn3 443..525 CDD:278470 17/87 (20%)
FN3 548..611 CDD:238020 14/69 (20%)
FN3 620..706 CDD:238020 19/93 (20%)
fn3 708..796 CDD:278470 26/99 (26%)
fn3 824..886 CDD:278470 5/61 (8%)
fn3 902..978 CDD:278470 21/79 (27%)
fn3 1013..1092 CDD:278470 25/83 (30%)
UP_III_II 1106..>1248 CDD:297589 39/150 (26%)
PTPc 1329..1582 CDD:214550 123/253 (49%)
PTPc 1355..1582 CDD:238006 109/227 (48%)
ptprqXP_031754742.1 FN3 109..203 CDD:238020
FN3 208..340 CDD:238020
FN3 358..443 CDD:238020
FN3 448..609 CDD:238020
FN3 616..703 CDD:238020
fn3 714..790 CDD:394996 15/60 (25%)
FN3 808..890 CDD:238020 15/81 (19%)
FN3 902..990 CDD:238020 10/90 (11%)
FN3 997..1084 CDD:238020 20/98 (20%)
FN3 1091..1187 CDD:238020 18/129 (14%)
FN3 1203..1272 CDD:238020 17/81 (21%)
FN3 1287..1377 CDD:238020 20/90 (22%)
FN3 1382..1457 CDD:238020 17/85 (20%)
FN3 1472..1576 CDD:238020 28/105 (27%)
FN3 1583..1678 CDD:238020 33/182 (18%)
FN3 1685..1782 CDD:238020 27/99 (27%)
PTP_tm 1820..1961 CDD:408631 37/153 (24%)
R-PTPc-Q 2083..2306 CDD:350464 105/222 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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