Sequence 1: | NP_001162669.1 | Gene: | Ptp4E / 31425 | FlyBaseID: | FBgn0004368 | Length: | 1767 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031753458.1 | Gene: | ptpro / 100135074 | XenbaseID: | XB-GENE-996931 | Length: | 1201 | Species: | Xenopus tropicalis |
Alignment Length: | 1314 | Identity: | 329/1314 - (25%) |
---|---|---|---|
Similarity: | 531/1314 - (40%) | Gaps: | 326/1314 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 443 FLDDRS---------NALHISWEPAE------------TGRQDSYRISYHEQTNASEVPAPFPVA 486
Fly 487 AESQITTNLTEYTLDSLLAGRRYLIAVQALSKGVASNA-SDITRYTRP---AAPLIQELRSIDQ- 546
Fly 547 GLMLSWRSDVNSRQDRYEVHYQRNGTREE----RTMATNE----TSLTIHYLHPGSGY-EVKVHA 602
Fly 603 ISH------------GVRSEPHSYFQAVFPKPPQNLTLQTVHTNLVVLHWQAPEGSDFSEYVVRY 655
Fly 656 RTDASPWQRISGLHENEAR--------IKDMHYGERYLVQVNTVSFGVESPHPLELNVTMPPQ-- 710
Fly 711 -------------PVSNVVPLVDSRNLTLEWPRPDGHVDFYTLKWWPTDEEDRVEFKNVTQLEDL 762
Fly 763 SSPSV--------RIPIEDLSPGRQYRFEVQASSNGIRSGTTHLSTRTMPLIQSDV------FIA 813
Fly 814 NAGH------EQGQD--------ETITLSYTPTPADSTRFDIYRFSMGDPTIKDKEKLANDTERK 864
Fly 865 LSFS-----GLTPGKLYNVTVWTVSGGVASLPVQR-LYRLHPLPISDLKAIQVAAREITLHWTAP 923
Fly 924 -AGEYTDF--ELQYLS----ADEEAP--QLLQNVTKNTEITLQGLRPYHNYTFTVVVRSGSIQGT 979
Fly 980 DFADVSVSTLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPGEVTFEWSLEPAEQHGPIDYFRIT 1044
Fly 1045 CQNADDAADVSS---YEFPVNATQGK--------------IDGLVPGNHYIFRIQAKSALGYGAE 1092
Fly 1093 REHIQTMPILAPPVPEPSVTPLEVSRTSSTIEISFRQGYFSNAHGMVRSYTIIIAEDVGKNASGL 1157
Fly 1158 EMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLEAEHFTIGTANCDKHQAGYCNGPLRAGT 1222
Fly 1223 TYRIKIRAFTDEDKFTDTVYS-SPITTERSDTVIVAATVS--AVLLVAM--VLVVVYCQHRCQLI 1282
Fly 1283 RRAS-----KLARMQDE--------------LAALPE---------GYITP-----------NRP 1308
Fly 1309 VHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQ 1373
Fly 1374 PVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKC 1438
Fly 1439 DQYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNCESRIMRHFHFTTWPDFGVP--EPPQ 1501
Fly 1502 SLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSDYVDIFGIVFAMRKERVF 1566
Fly 1567 MVQTEQQYVCIHQC 1580 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptp4E | NP_001162669.1 | FN3 | 151..242 | CDD:238020 | |
fn3 | 247..328 | CDD:278470 | |||
fn3 | 343..417 | CDD:278470 | |||
fn3 | 443..525 | CDD:278470 | 24/103 (23%) | ||
FN3 | 548..611 | CDD:238020 | 13/83 (16%) | ||
FN3 | 620..706 | CDD:238020 | 16/93 (17%) | ||
fn3 | 708..796 | CDD:278470 | 18/110 (16%) | ||
fn3 | 824..886 | CDD:278470 | 16/66 (24%) | ||
fn3 | 902..978 | CDD:278470 | 16/84 (19%) | ||
fn3 | 1013..1092 | CDD:278470 | 19/95 (20%) | ||
UP_III_II | 1106..>1248 | CDD:297589 | 19/142 (13%) | ||
PTPc | 1329..1582 | CDD:214550 | 130/254 (51%) | ||
PTPc | 1355..1582 | CDD:238006 | 115/228 (50%) | ||
ptpro | XP_031753458.1 | fn3 | 422..506 | CDD:394996 | 17/85 (20%) |
FN3 | 515..601 | CDD:238020 | 17/85 (20%) | ||
fn3 | 709..790 | CDD:394996 | 16/130 (12%) | ||
R-PTPc-O | 936..1180 | CDD:350462 | 121/241 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D16347at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |